Gene : Eucgr.C02905 E. grandis v2.0
Defline:  (1 of 1) PTHR21573:SF0 - ER MEMBRANE PROTEIN COMPLEX SUBUNIT 1 Genomic Order:  2369
Name:  ? Eucgr.C02905 Secondary Identifier:  ? PAC:32039889
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C02905 0.5kb upstream 0.5kb upstream 8618 true Chr03: 58506750-58515367 Eucalyptus grandis
Eucgr.C02905 0.5kb upstream 0.5kb upstream 500 false Chr03: 58514868-58515367 Eucalyptus grandis
Eucgr.C02905 0.5kb downstream 0.5kb downstream 8618 true Chr03: 58506250-58514867 Eucalyptus grandis
Eucgr.C02905 0.5kb downstream 0.5kb downstream 500 false Chr03: 58506250-58506749 Eucalyptus grandis
Eucgr.C02905 1.0kb upstream 1.0kb upstream 9118 true Chr03: 58506750-58515867 Eucalyptus grandis
Eucgr.C02905 1.0kb upstream 1.0kb upstream 1000 false Chr03: 58514868-58515867 Eucalyptus grandis
Eucgr.C02905 1.0kb downstream 1.0kb downstream 9118 true Chr03: 58505750-58514867 Eucalyptus grandis
Eucgr.C02905 1.0kb downstream 1.0kb downstream 1000 false Chr03: 58505750-58506749 Eucalyptus grandis
Eucgr.C02905 2.0kb upstream 2.0kb upstream 10118 true Chr03: 58506750-58516867 Eucalyptus grandis
Eucgr.C02905 2.0kb upstream 2.0kb upstream 2000 false Chr03: 58514868-58516867 Eucalyptus grandis
Eucgr.C02905 2.0kb downstream 2.0kb downstream 10118 true Chr03: 58504750-58514867 Eucalyptus grandis
Eucgr.C02905 2.0kb downstream 2.0kb downstream 2000 false Chr03: 58504750-58506749 Eucalyptus grandis
Eucgr.C02905 5.0kb upstream 5.0kb upstream 13118 true Chr03: 58506750-58519867 Eucalyptus grandis
Eucgr.C02905 5.0kb upstream 5.0kb upstream 5000 false Chr03: 58514868-58519867 Eucalyptus grandis
Eucgr.C02905 5.0kb downstream 5.0kb downstream 13118 true Chr03: 58501750-58514867 Eucalyptus grandis
Eucgr.C02905 5.0kb downstream 5.0kb downstream 5000 false Chr03: 58501750-58506749 Eucalyptus grandis
Eucgr.C02905 10.0kb upstream 10.0kb upstream 18118 true Chr03: 58506750-58524867 Eucalyptus grandis
Eucgr.C02905 10.0kb upstream 10.0kb upstream 10000 false Chr03: 58514868-58524867 Eucalyptus grandis
Eucgr.C02905 10.0kb downstream 10.0kb downstream 18118 true Chr03: 58496750-58514867 Eucalyptus grandis
Eucgr.C02905 10.0kb downstream 10.0kb downstream 10000 false Chr03: 58496750-58506749 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063499 5270 Rosid View MSA
123736612 5271 Pentapetalae View MSA
122785753 5272 Eudicot View MSA
122044335 5273 Angiosperm View MSA
121345434 5274 Embryophyte View MSA
123428246 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.4026 0.0 47.4231    
cufflinks 15.0655 0.0 33.3166   Low
cufflinks 23.2733 0.0 51.7013    
cufflinks 19.2869 0.0 42.7245    
cufflinks 17.3716 0.0 38.4249    
cufflinks 29.7644 0.0 66.3922   High

0 Strain