Gene : Eucgr.C02900 E. grandis v2.0
Defline:  (1 of 2) PTHR12446:SF14 - PROTEIN LIN-54 HOMOLOG Genomic Order:  2365
Name:  ? Eucgr.C02900 Secondary Identifier:  ? PAC:32036407
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C02900 0.5kb upstream 0.5kb upstream 5066 true Chr03: 58474196-58479261 Eucalyptus grandis
Eucgr.C02900 0.5kb upstream 0.5kb upstream 500 false Chr03: 58478762-58479261 Eucalyptus grandis
Eucgr.C02900 0.5kb downstream 0.5kb downstream 5066 true Chr03: 58473696-58478761 Eucalyptus grandis
Eucgr.C02900 0.5kb downstream 0.5kb downstream 500 false Chr03: 58473696-58474195 Eucalyptus grandis
Eucgr.C02900 1.0kb upstream 1.0kb upstream 5566 true Chr03: 58474196-58479761 Eucalyptus grandis
Eucgr.C02900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 58478762-58479761 Eucalyptus grandis
Eucgr.C02900 1.0kb downstream 1.0kb downstream 5566 true Chr03: 58473196-58478761 Eucalyptus grandis
Eucgr.C02900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 58473196-58474195 Eucalyptus grandis
Eucgr.C02900 2.0kb upstream 2.0kb upstream 6566 true Chr03: 58474196-58480761 Eucalyptus grandis
Eucgr.C02900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 58478762-58480761 Eucalyptus grandis
Eucgr.C02900 2.0kb downstream 2.0kb downstream 6566 true Chr03: 58472196-58478761 Eucalyptus grandis
Eucgr.C02900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 58472196-58474195 Eucalyptus grandis
Eucgr.C02900 5.0kb upstream 5.0kb upstream 9566 true Chr03: 58474196-58483761 Eucalyptus grandis
Eucgr.C02900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 58478762-58483761 Eucalyptus grandis
Eucgr.C02900 5.0kb downstream 5.0kb downstream 9566 true Chr03: 58469196-58478761 Eucalyptus grandis
Eucgr.C02900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 58469196-58474195 Eucalyptus grandis
Eucgr.C02900 10.0kb upstream 10.0kb upstream 14566 true Chr03: 58474196-58488761 Eucalyptus grandis
Eucgr.C02900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 58478762-58488761 Eucalyptus grandis
Eucgr.C02900 10.0kb downstream 10.0kb downstream 14566 true Chr03: 58464196-58478761 Eucalyptus grandis
Eucgr.C02900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 58464196-58474195 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124073208 5270 Rosid View MSA
123756225 5271 Pentapetalae View MSA
122777394 5272 Eudicot View MSA
122042831 5273 Angiosperm View MSA
121349847 5274 Embryophyte View MSA
123426596 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.42176 0.0 3.85754   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.15294 0.0 3.19646    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.954444 0.0 2.70085    

0 Strain