Gene : Eucgr.C02884 E. grandis v2.0
Defline:  (1 of 1) PTHR33168:SF12 - EXPRESSED PROTEIN Genomic Order:  2349
Name:  ? Eucgr.C02884 Secondary Identifier:  ? PAC:32039783
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C02884 0.5kb upstream 0.5kb upstream 1081 true Chr03: 58314627-58315707 Eucalyptus grandis
Eucgr.C02884 0.5kb upstream 0.5kb upstream 500 false Chr03: 58315208-58315707 Eucalyptus grandis
Eucgr.C02884 0.5kb downstream 0.5kb downstream 1081 true Chr03: 58314127-58315207 Eucalyptus grandis
Eucgr.C02884 0.5kb downstream 0.5kb downstream 500 false Chr03: 58314127-58314626 Eucalyptus grandis
Eucgr.C02884 1.0kb upstream 1.0kb upstream 1581 true Chr03: 58314627-58316207 Eucalyptus grandis
Eucgr.C02884 1.0kb upstream 1.0kb upstream 1000 false Chr03: 58315208-58316207 Eucalyptus grandis
Eucgr.C02884 1.0kb downstream 1.0kb downstream 1581 true Chr03: 58313627-58315207 Eucalyptus grandis
Eucgr.C02884 1.0kb downstream 1.0kb downstream 1000 false Chr03: 58313627-58314626 Eucalyptus grandis
Eucgr.C02884 2.0kb upstream 2.0kb upstream 2581 true Chr03: 58314627-58317207 Eucalyptus grandis
Eucgr.C02884 2.0kb upstream 2.0kb upstream 2000 false Chr03: 58315208-58317207 Eucalyptus grandis
Eucgr.C02884 2.0kb downstream 2.0kb downstream 2581 true Chr03: 58312627-58315207 Eucalyptus grandis
Eucgr.C02884 2.0kb downstream 2.0kb downstream 2000 false Chr03: 58312627-58314626 Eucalyptus grandis
Eucgr.C02884 5.0kb upstream 5.0kb upstream 5581 true Chr03: 58314627-58320207 Eucalyptus grandis
Eucgr.C02884 5.0kb upstream 5.0kb upstream 5000 false Chr03: 58315208-58320207 Eucalyptus grandis
Eucgr.C02884 5.0kb downstream 5.0kb downstream 5581 true Chr03: 58309627-58315207 Eucalyptus grandis
Eucgr.C02884 5.0kb downstream 5.0kb downstream 5000 false Chr03: 58309627-58314626 Eucalyptus grandis
Eucgr.C02884 10.0kb upstream 10.0kb upstream 10581 true Chr03: 58314627-58325207 Eucalyptus grandis
Eucgr.C02884 10.0kb upstream 10.0kb upstream 10000 false Chr03: 58315208-58325207 Eucalyptus grandis
Eucgr.C02884 10.0kb downstream 10.0kb downstream 10581 true Chr03: 58304627-58315207 Eucalyptus grandis
Eucgr.C02884 10.0kb downstream 10.0kb downstream 10000 false Chr03: 58304627-58314626 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124074176 5270 Rosid View MSA
123744638 5271 Pentapetalae View MSA
122795740 5272 Eudicot View MSA
122048464 5273 Angiosperm View MSA
121310979 5274 Embryophyte View MSA
123348342 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.41516 0.0 24.925    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.29486 0.0 7.05372   Low
cufflinks 3.37819 0.0 9.91163    
cufflinks 7.57982 0.0 20.47    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain