Gene : Eucgr.C02795 E. grandis v2.0
Defline:  (1 of 2) PTHR12169:SF5 - AFG1-LIKE ATPASE FAMILY PROTEIN Genomic Order:  2279
Name:  ? Eucgr.C02795 Secondary Identifier:  ? PAC:32036196
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C02795 0.5kb upstream 0.5kb upstream 7828 true Chr03: 57008170-57015997 Eucalyptus grandis
Eucgr.C02795 0.5kb upstream 0.5kb upstream 500 false Chr03: 57008170-57008669 Eucalyptus grandis
Eucgr.C02795 0.5kb downstream 0.5kb downstream 7828 true Chr03: 57008670-57016497 Eucalyptus grandis
Eucgr.C02795 0.5kb downstream 0.5kb downstream 500 false Chr03: 57015998-57016497 Eucalyptus grandis
Eucgr.C02795 1.0kb upstream 1.0kb upstream 8328 true Chr03: 57007670-57015997 Eucalyptus grandis
Eucgr.C02795 1.0kb upstream 1.0kb upstream 1000 false Chr03: 57007670-57008669 Eucalyptus grandis
Eucgr.C02795 1.0kb downstream 1.0kb downstream 8328 true Chr03: 57008670-57016997 Eucalyptus grandis
Eucgr.C02795 1.0kb downstream 1.0kb downstream 1000 false Chr03: 57015998-57016997 Eucalyptus grandis
Eucgr.C02795 2.0kb upstream 2.0kb upstream 9328 true Chr03: 57006670-57015997 Eucalyptus grandis
Eucgr.C02795 2.0kb upstream 2.0kb upstream 2000 false Chr03: 57006670-57008669 Eucalyptus grandis
Eucgr.C02795 2.0kb downstream 2.0kb downstream 9328 true Chr03: 57008670-57017997 Eucalyptus grandis
Eucgr.C02795 2.0kb downstream 2.0kb downstream 2000 false Chr03: 57015998-57017997 Eucalyptus grandis
Eucgr.C02795 5.0kb upstream 5.0kb upstream 12328 true Chr03: 57003670-57015997 Eucalyptus grandis
Eucgr.C02795 5.0kb upstream 5.0kb upstream 5000 false Chr03: 57003670-57008669 Eucalyptus grandis
Eucgr.C02795 5.0kb downstream 5.0kb downstream 12328 true Chr03: 57008670-57020997 Eucalyptus grandis
Eucgr.C02795 5.0kb downstream 5.0kb downstream 5000 false Chr03: 57015998-57020997 Eucalyptus grandis
Eucgr.C02795 10.0kb upstream 10.0kb upstream 17328 true Chr03: 56998670-57015997 Eucalyptus grandis
Eucgr.C02795 10.0kb upstream 10.0kb upstream 10000 false Chr03: 56998670-57008669 Eucalyptus grandis
Eucgr.C02795 10.0kb downstream 10.0kb downstream 17328 true Chr03: 57008670-57025997 Eucalyptus grandis
Eucgr.C02795 10.0kb downstream 10.0kb downstream 10000 false Chr03: 57015998-57025997 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069406 5270 Rosid View MSA
123741910 5271 Pentapetalae View MSA
122794627 5272 Eudicot View MSA
122048281 5273 Angiosperm View MSA
121348170 5274 Embryophyte View MSA
123427307 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.729536 0.0 2.14134   High
cufflinks 0.384781 0.0 1.2098 Low  
cufflinks 0.521292 0.0 1.58153    
cufflinks 0.156733 0.0 0.552925 Low Low
cufflinks 0.510056 0.0 1.55468 Low  
cufflinks 0.18875 0.0 0.659969 Low Low

0 Strain