Gene : Eucgr.C02782 E. grandis v2.0
Defline:  (1 of 3) PTHR23079:SF1 - PROTEIN RRF-3 Genomic Order:  2269
Name:  ? Eucgr.C02782 Secondary Identifier:  ? PAC:32036116
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C02782 0.5kb upstream 0.5kb upstream 4730 true Chr03: 56901039-56905768 Eucalyptus grandis
Eucgr.C02782 0.5kb upstream 0.5kb upstream 500 false Chr03: 56905269-56905768 Eucalyptus grandis
Eucgr.C02782 0.5kb downstream 0.5kb downstream 4730 true Chr03: 56900539-56905268 Eucalyptus grandis
Eucgr.C02782 0.5kb downstream 0.5kb downstream 500 false Chr03: 56900539-56901038 Eucalyptus grandis
Eucgr.C02782 1.0kb upstream 1.0kb upstream 5230 true Chr03: 56901039-56906268 Eucalyptus grandis
Eucgr.C02782 1.0kb upstream 1.0kb upstream 1000 false Chr03: 56905269-56906268 Eucalyptus grandis
Eucgr.C02782 1.0kb downstream 1.0kb downstream 5230 true Chr03: 56900039-56905268 Eucalyptus grandis
Eucgr.C02782 1.0kb downstream 1.0kb downstream 1000 false Chr03: 56900039-56901038 Eucalyptus grandis
Eucgr.C02782 2.0kb upstream 2.0kb upstream 6230 true Chr03: 56901039-56907268 Eucalyptus grandis
Eucgr.C02782 2.0kb upstream 2.0kb upstream 2000 false Chr03: 56905269-56907268 Eucalyptus grandis
Eucgr.C02782 2.0kb downstream 2.0kb downstream 6230 true Chr03: 56899039-56905268 Eucalyptus grandis
Eucgr.C02782 2.0kb downstream 2.0kb downstream 2000 false Chr03: 56899039-56901038 Eucalyptus grandis
Eucgr.C02782 5.0kb upstream 5.0kb upstream 9230 true Chr03: 56901039-56910268 Eucalyptus grandis
Eucgr.C02782 5.0kb upstream 5.0kb upstream 5000 false Chr03: 56905269-56910268 Eucalyptus grandis
Eucgr.C02782 5.0kb downstream 5.0kb downstream 9230 true Chr03: 56896039-56905268 Eucalyptus grandis
Eucgr.C02782 5.0kb downstream 5.0kb downstream 5000 false Chr03: 56896039-56901038 Eucalyptus grandis
Eucgr.C02782 10.0kb upstream 10.0kb upstream 14230 true Chr03: 56901039-56915268 Eucalyptus grandis
Eucgr.C02782 10.0kb upstream 10.0kb upstream 10000 false Chr03: 56905269-56915268 Eucalyptus grandis
Eucgr.C02782 10.0kb downstream 10.0kb downstream 14230 true Chr03: 56891039-56905268 Eucalyptus grandis
Eucgr.C02782 10.0kb downstream 10.0kb downstream 10000 false Chr03: 56891039-56901038 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063849 5270 Rosid View MSA
123737046 5271 Pentapetalae View MSA
122789317 5272 Eudicot View MSA
122045596 5273 Angiosperm View MSA
121346387 5274 Embryophyte View MSA
123428546 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.05133E-4 0.0 0.00581423 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.00413955 0.0 0.0398455 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain