Gene : Eucgr.C03701 E. grandis v2.0
Defline:  (1 of 5) KOG1595 - CCCH-type Zn-finger protein Genomic Order:  2990
Name:  ? Eucgr.C03701 Secondary Identifier:  ? PAC:32037070
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C03701 0.5kb upstream 0.5kb upstream 2710 true Chr03: 75518776-75521485 Eucalyptus grandis
Eucgr.C03701 0.5kb upstream 0.5kb upstream 500 false Chr03: 75520986-75521485 Eucalyptus grandis
Eucgr.C03701 0.5kb downstream 0.5kb downstream 2710 true Chr03: 75518276-75520985 Eucalyptus grandis
Eucgr.C03701 0.5kb downstream 0.5kb downstream 500 false Chr03: 75518276-75518775 Eucalyptus grandis
Eucgr.C03701 1.0kb upstream 1.0kb upstream 3210 true Chr03: 75518776-75521985 Eucalyptus grandis
Eucgr.C03701 1.0kb upstream 1.0kb upstream 1000 false Chr03: 75520986-75521985 Eucalyptus grandis
Eucgr.C03701 1.0kb downstream 1.0kb downstream 3210 true Chr03: 75517776-75520985 Eucalyptus grandis
Eucgr.C03701 1.0kb downstream 1.0kb downstream 1000 false Chr03: 75517776-75518775 Eucalyptus grandis
Eucgr.C03701 2.0kb upstream 2.0kb upstream 4210 true Chr03: 75518776-75522985 Eucalyptus grandis
Eucgr.C03701 2.0kb upstream 2.0kb upstream 2000 false Chr03: 75520986-75522985 Eucalyptus grandis
Eucgr.C03701 2.0kb downstream 2.0kb downstream 4210 true Chr03: 75516776-75520985 Eucalyptus grandis
Eucgr.C03701 2.0kb downstream 2.0kb downstream 2000 false Chr03: 75516776-75518775 Eucalyptus grandis
Eucgr.C03701 5.0kb upstream 5.0kb upstream 7210 true Chr03: 75518776-75525985 Eucalyptus grandis
Eucgr.C03701 5.0kb upstream 5.0kb upstream 5000 false Chr03: 75520986-75525985 Eucalyptus grandis
Eucgr.C03701 5.0kb downstream 5.0kb downstream 7210 true Chr03: 75513776-75520985 Eucalyptus grandis
Eucgr.C03701 5.0kb downstream 5.0kb downstream 5000 false Chr03: 75513776-75518775 Eucalyptus grandis
Eucgr.C03701 10.0kb upstream 10.0kb upstream 12210 true Chr03: 75518776-75530985 Eucalyptus grandis
Eucgr.C03701 10.0kb upstream 10.0kb upstream 10000 false Chr03: 75520986-75530985 Eucalyptus grandis
Eucgr.C03701 10.0kb downstream 10.0kb downstream 12210 true Chr03: 75508776-75520985 Eucalyptus grandis
Eucgr.C03701 10.0kb downstream 10.0kb downstream 10000 false Chr03: 75508776-75518775 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070432 5270 Rosid View MSA
123751061 5271 Pentapetalae View MSA
122788502 5272 Eudicot View MSA
122046777 5273 Angiosperm View MSA
123429052 5275 Viridiplantae View MSA
121351105 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 37.2607 0.0 82.8271 High  
cufflinks 25.124 0.0 55.5605    
cufflinks 40.3338 0.0 89.753 High  
cufflinks 25.0929 0.0 55.4913    
cufflinks 33.4894 0.0 74.2201    
cufflinks 13.5278 0.0 30.2031   Low

0 Strain