Gene : Eucgr.C03570 E. grandis v2.0
Defline:  (1 of 1) PTHR10362//PTHR10362:SF18 - HISTIDINE AMMONIA-LYASE Genomic Order:  2761
Name:  ? Eucgr.C03570 Secondary Identifier:  ? PAC:32036135
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-1121 Eucalyptus grandis pathologic  
Egrandis PWY1F-467 Eucalyptus grandis pathologic  
Egrandis PWY-7186 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C03570 0.5kb upstream 0.5kb upstream 2817 true Chr03: 69759339-69762155 Eucalyptus grandis
Eucgr.C03570 0.5kb upstream 0.5kb upstream 500 false Chr03: 69759339-69759838 Eucalyptus grandis
Eucgr.C03570 0.5kb downstream 0.5kb downstream 2817 true Chr03: 69759839-69762655 Eucalyptus grandis
Eucgr.C03570 0.5kb downstream 0.5kb downstream 500 false Chr03: 69762156-69762655 Eucalyptus grandis
Eucgr.C03570 1.0kb upstream 1.0kb upstream 3317 true Chr03: 69758839-69762155 Eucalyptus grandis
Eucgr.C03570 1.0kb upstream 1.0kb upstream 1000 false Chr03: 69758839-69759838 Eucalyptus grandis
Eucgr.C03570 1.0kb downstream 1.0kb downstream 3317 true Chr03: 69759839-69763155 Eucalyptus grandis
Eucgr.C03570 1.0kb downstream 1.0kb downstream 1000 false Chr03: 69762156-69763155 Eucalyptus grandis
Eucgr.C03570 2.0kb upstream 2.0kb upstream 4317 true Chr03: 69757839-69762155 Eucalyptus grandis
Eucgr.C03570 2.0kb upstream 2.0kb upstream 2000 false Chr03: 69757839-69759838 Eucalyptus grandis
Eucgr.C03570 2.0kb downstream 2.0kb downstream 4317 true Chr03: 69759839-69764155 Eucalyptus grandis
Eucgr.C03570 2.0kb downstream 2.0kb downstream 2000 false Chr03: 69762156-69764155 Eucalyptus grandis
Eucgr.C03570 5.0kb upstream 5.0kb upstream 7317 true Chr03: 69754839-69762155 Eucalyptus grandis
Eucgr.C03570 5.0kb upstream 5.0kb upstream 5000 false Chr03: 69754839-69759838 Eucalyptus grandis
Eucgr.C03570 5.0kb downstream 5.0kb downstream 7317 true Chr03: 69759839-69767155 Eucalyptus grandis
Eucgr.C03570 5.0kb downstream 5.0kb downstream 5000 false Chr03: 69762156-69767155 Eucalyptus grandis
Eucgr.C03570 10.0kb upstream 10.0kb upstream 12317 true Chr03: 69749839-69762155 Eucalyptus grandis
Eucgr.C03570 10.0kb upstream 10.0kb upstream 10000 false Chr03: 69749839-69759838 Eucalyptus grandis
Eucgr.C03570 10.0kb downstream 10.0kb downstream 12317 true Chr03: 69759839-69772155 Eucalyptus grandis
Eucgr.C03570 10.0kb downstream 10.0kb downstream 10000 false Chr03: 69762156-69772155 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124072552 5270 Rosid View MSA
123628154 5271 Pentapetalae View MSA
122662449 5272 Eudicot View MSA
122050365 5273 Angiosperm View MSA
121351477 5274 Embryophyte View MSA
123382181 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.60349 0.0 17.4572    
cufflinks 0.308742 0.0 0.993982 Low Low
cufflinks 14.7215 0.0 32.7825    
cufflinks 5.43768 0.0 12.9371    
cufflinks 0.407918 0.0 1.26171 Low Low
cufflinks 13.5658 0.0 30.1865    

0 Strain