Gene : Eucgr.C03471 E. grandis v2.0
Defline:  (1 of 2) PTHR12919 - 30S RIBOSOMAL PROTEIN S16 Genomic Order:  2877
Name:  ? Eucgr.C03471 Secondary Identifier:  ? PAC:32036732
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C03471 0.5kb upstream 0.5kb upstream 3116 true Chr03: 72781888-72785003 Eucalyptus grandis
Eucgr.C03471 0.5kb upstream 0.5kb upstream 500 false Chr03: 72781888-72782387 Eucalyptus grandis
Eucgr.C03471 0.5kb downstream 0.5kb downstream 3116 true Chr03: 72782388-72785503 Eucalyptus grandis
Eucgr.C03471 0.5kb downstream 0.5kb downstream 500 false Chr03: 72785004-72785503 Eucalyptus grandis
Eucgr.C03471 1.0kb upstream 1.0kb upstream 3616 true Chr03: 72781388-72785003 Eucalyptus grandis
Eucgr.C03471 1.0kb upstream 1.0kb upstream 1000 false Chr03: 72781388-72782387 Eucalyptus grandis
Eucgr.C03471 1.0kb downstream 1.0kb downstream 3616 true Chr03: 72782388-72786003 Eucalyptus grandis
Eucgr.C03471 1.0kb downstream 1.0kb downstream 1000 false Chr03: 72785004-72786003 Eucalyptus grandis
Eucgr.C03471 2.0kb upstream 2.0kb upstream 4616 true Chr03: 72780388-72785003 Eucalyptus grandis
Eucgr.C03471 2.0kb upstream 2.0kb upstream 2000 false Chr03: 72780388-72782387 Eucalyptus grandis
Eucgr.C03471 2.0kb downstream 2.0kb downstream 4616 true Chr03: 72782388-72787003 Eucalyptus grandis
Eucgr.C03471 2.0kb downstream 2.0kb downstream 2000 false Chr03: 72785004-72787003 Eucalyptus grandis
Eucgr.C03471 5.0kb upstream 5.0kb upstream 7616 true Chr03: 72777388-72785003 Eucalyptus grandis
Eucgr.C03471 5.0kb upstream 5.0kb upstream 5000 false Chr03: 72777388-72782387 Eucalyptus grandis
Eucgr.C03471 5.0kb downstream 5.0kb downstream 7616 true Chr03: 72782388-72790003 Eucalyptus grandis
Eucgr.C03471 5.0kb downstream 5.0kb downstream 5000 false Chr03: 72785004-72790003 Eucalyptus grandis
Eucgr.C03471 10.0kb upstream 10.0kb upstream 12616 true Chr03: 72772388-72785003 Eucalyptus grandis
Eucgr.C03471 10.0kb upstream 10.0kb upstream 10000 false Chr03: 72772388-72782387 Eucalyptus grandis
Eucgr.C03471 10.0kb downstream 10.0kb downstream 12616 true Chr03: 72782388-72795003 Eucalyptus grandis
Eucgr.C03471 10.0kb downstream 10.0kb downstream 10000 false Chr03: 72785004-72795003 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065829 5270 Rosid View MSA
123738502 5271 Pentapetalae View MSA
122792819 5272 Eudicot View MSA
122051162 5273 Angiosperm View MSA
121348917 5274 Embryophyte View MSA
123426601 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.95707 0.0 19.9775    
cufflinks 2.38872 0.0 6.76518   Low
cufflinks 8.29335 0.0 20.7757    
cufflinks 8.07727 0.0 20.2694    
cufflinks 11.5524 0.0 27.9981    
cufflinks 10.3612 0.0 25.249    

0 Strain