Gene : Eucgr.C03337 E. grandis v2.0
Defline:  (1 of 12) PTHR31238:SF21 - GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 Genomic Order:  2678
Name:  ? Eucgr.C03337 Secondary Identifier:  ? PAC:32037588
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C03337 0.5kb upstream 0.5kb upstream 1409 true Chr03: 66487188-66488596 Eucalyptus grandis
Eucgr.C03337 0.5kb upstream 0.5kb upstream 500 false Chr03: 66488097-66488596 Eucalyptus grandis
Eucgr.C03337 0.5kb downstream 0.5kb downstream 1409 true Chr03: 66486688-66488096 Eucalyptus grandis
Eucgr.C03337 0.5kb downstream 0.5kb downstream 500 false Chr03: 66486688-66487187 Eucalyptus grandis
Eucgr.C03337 1.0kb upstream 1.0kb upstream 1909 true Chr03: 66487188-66489096 Eucalyptus grandis
Eucgr.C03337 1.0kb upstream 1.0kb upstream 1000 false Chr03: 66488097-66489096 Eucalyptus grandis
Eucgr.C03337 1.0kb downstream 1.0kb downstream 1909 true Chr03: 66486188-66488096 Eucalyptus grandis
Eucgr.C03337 1.0kb downstream 1.0kb downstream 1000 false Chr03: 66486188-66487187 Eucalyptus grandis
Eucgr.C03337 2.0kb upstream 2.0kb upstream 2909 true Chr03: 66487188-66490096 Eucalyptus grandis
Eucgr.C03337 2.0kb upstream 2.0kb upstream 2000 false Chr03: 66488097-66490096 Eucalyptus grandis
Eucgr.C03337 2.0kb downstream 2.0kb downstream 2909 true Chr03: 66485188-66488096 Eucalyptus grandis
Eucgr.C03337 2.0kb downstream 2.0kb downstream 2000 false Chr03: 66485188-66487187 Eucalyptus grandis
Eucgr.C03337 5.0kb upstream 5.0kb upstream 5909 true Chr03: 66487188-66493096 Eucalyptus grandis
Eucgr.C03337 5.0kb upstream 5.0kb upstream 5000 false Chr03: 66488097-66493096 Eucalyptus grandis
Eucgr.C03337 5.0kb downstream 5.0kb downstream 5909 true Chr03: 66482188-66488096 Eucalyptus grandis
Eucgr.C03337 5.0kb downstream 5.0kb downstream 5000 false Chr03: 66482188-66487187 Eucalyptus grandis
Eucgr.C03337 10.0kb upstream 10.0kb upstream 10909 true Chr03: 66487188-66498096 Eucalyptus grandis
Eucgr.C03337 10.0kb upstream 10.0kb upstream 10000 false Chr03: 66488097-66498096 Eucalyptus grandis
Eucgr.C03337 10.0kb downstream 10.0kb downstream 10909 true Chr03: 66477188-66488096 Eucalyptus grandis
Eucgr.C03337 10.0kb downstream 10.0kb downstream 10000 false Chr03: 66477188-66487187 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066370 5270 Rosid View MSA
123751196 5271 Pentapetalae View MSA
122788614 5272 Eudicot View MSA
122044188 5273 Angiosperm View MSA
121352324 5274 Embryophyte View MSA
123427618 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.5468 0.0 54.2544    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0572502 0.0 0.484024 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 36.6298 0.0 84.411 High  

0 Strain