Gene : Eucgr.C04146 E. grandis v2.0
Defline:  (1 of 15) PTHR10209:SF211 - 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED Genomic Order:  3177
Name:  ? Eucgr.C04146 Secondary Identifier:  ? PAC:32040165
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C04146 0.5kb upstream 0.5kb upstream 1822 true Chr03: 78561936-78563757 Eucalyptus grandis
Eucgr.C04146 0.5kb upstream 0.5kb upstream 500 false Chr03: 78563258-78563757 Eucalyptus grandis
Eucgr.C04146 0.5kb downstream 0.5kb downstream 1822 true Chr03: 78561436-78563257 Eucalyptus grandis
Eucgr.C04146 0.5kb downstream 0.5kb downstream 500 false Chr03: 78561436-78561935 Eucalyptus grandis
Eucgr.C04146 1.0kb upstream 1.0kb upstream 2322 true Chr03: 78561936-78564257 Eucalyptus grandis
Eucgr.C04146 1.0kb upstream 1.0kb upstream 1000 false Chr03: 78563258-78564257 Eucalyptus grandis
Eucgr.C04146 1.0kb downstream 1.0kb downstream 2322 true Chr03: 78560936-78563257 Eucalyptus grandis
Eucgr.C04146 1.0kb downstream 1.0kb downstream 1000 false Chr03: 78560936-78561935 Eucalyptus grandis
Eucgr.C04146 2.0kb upstream 2.0kb upstream 3322 true Chr03: 78561936-78565257 Eucalyptus grandis
Eucgr.C04146 2.0kb upstream 2.0kb upstream 2000 false Chr03: 78563258-78565257 Eucalyptus grandis
Eucgr.C04146 2.0kb downstream 2.0kb downstream 3322 true Chr03: 78559936-78563257 Eucalyptus grandis
Eucgr.C04146 2.0kb downstream 2.0kb downstream 2000 false Chr03: 78559936-78561935 Eucalyptus grandis
Eucgr.C04146 5.0kb upstream 5.0kb upstream 6322 true Chr03: 78561936-78568257 Eucalyptus grandis
Eucgr.C04146 5.0kb upstream 5.0kb upstream 5000 false Chr03: 78563258-78568257 Eucalyptus grandis
Eucgr.C04146 5.0kb downstream 5.0kb downstream 6322 true Chr03: 78556936-78563257 Eucalyptus grandis
Eucgr.C04146 5.0kb downstream 5.0kb downstream 5000 false Chr03: 78556936-78561935 Eucalyptus grandis
Eucgr.C04146 10.0kb upstream 10.0kb upstream 11322 true Chr03: 78561936-78573257 Eucalyptus grandis
Eucgr.C04146 10.0kb upstream 10.0kb upstream 10000 false Chr03: 78563258-78573257 Eucalyptus grandis
Eucgr.C04146 10.0kb downstream 10.0kb downstream 11322 true Chr03: 78551936-78563257 Eucalyptus grandis
Eucgr.C04146 10.0kb downstream 10.0kb downstream 10000 false Chr03: 78551936-78561935 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124051666 5270 Rosid View MSA
123752676 5271 Pentapetalae View MSA
122774719 5272 Eudicot View MSA
122051611 5273 Angiosperm View MSA
123429101 5275 Viridiplantae View MSA
121351374 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain