Gene : Eucgr.C04031 E. grandis v2.0
Defline:  (1 of 1) PTHR21266:SF29 - PROTEIN TIC 55, CHLOROPLASTIC Genomic Order:  3466
Name:  ? Eucgr.C04031 Secondary Identifier:  ? PAC:32036721
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5098 Eucalyptus grandis pathologic  
Egrandis PWY-6927 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C04031 0.5kb upstream 0.5kb upstream 3980 true Chr03: 83341919-83345898 Eucalyptus grandis
Eucgr.C04031 0.5kb upstream 0.5kb upstream 500 false Chr03: 83345399-83345898 Eucalyptus grandis
Eucgr.C04031 0.5kb downstream 0.5kb downstream 3980 true Chr03: 83341419-83345398 Eucalyptus grandis
Eucgr.C04031 0.5kb downstream 0.5kb downstream 500 false Chr03: 83341419-83341918 Eucalyptus grandis
Eucgr.C04031 1.0kb upstream 1.0kb upstream 4480 true Chr03: 83341919-83346398 Eucalyptus grandis
Eucgr.C04031 1.0kb upstream 1.0kb upstream 1000 false Chr03: 83345399-83346398 Eucalyptus grandis
Eucgr.C04031 1.0kb downstream 1.0kb downstream 4480 true Chr03: 83340919-83345398 Eucalyptus grandis
Eucgr.C04031 1.0kb downstream 1.0kb downstream 1000 false Chr03: 83340919-83341918 Eucalyptus grandis
Eucgr.C04031 2.0kb upstream 2.0kb upstream 5480 true Chr03: 83341919-83347398 Eucalyptus grandis
Eucgr.C04031 2.0kb upstream 2.0kb upstream 2000 false Chr03: 83345399-83347398 Eucalyptus grandis
Eucgr.C04031 2.0kb downstream 2.0kb downstream 5480 true Chr03: 83339919-83345398 Eucalyptus grandis
Eucgr.C04031 2.0kb downstream 2.0kb downstream 2000 false Chr03: 83339919-83341918 Eucalyptus grandis
Eucgr.C04031 5.0kb upstream 5.0kb upstream 8480 true Chr03: 83341919-83350398 Eucalyptus grandis
Eucgr.C04031 5.0kb upstream 5.0kb upstream 5000 false Chr03: 83345399-83350398 Eucalyptus grandis
Eucgr.C04031 5.0kb downstream 5.0kb downstream 8480 true Chr03: 83336919-83345398 Eucalyptus grandis
Eucgr.C04031 5.0kb downstream 5.0kb downstream 5000 false Chr03: 83336919-83341918 Eucalyptus grandis
Eucgr.C04031 10.0kb upstream 10.0kb upstream 13480 true Chr03: 83341919-83355398 Eucalyptus grandis
Eucgr.C04031 10.0kb upstream 10.0kb upstream 10000 false Chr03: 83345399-83355398 Eucalyptus grandis
Eucgr.C04031 10.0kb downstream 10.0kb downstream 13480 true Chr03: 83331919-83345398 Eucalyptus grandis
Eucgr.C04031 10.0kb downstream 10.0kb downstream 10000 false Chr03: 83331919-83341918 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068769 5270 Rosid View MSA
123736792 5271 Pentapetalae View MSA
122790775 5272 Eudicot View MSA
122046854 5273 Angiosperm View MSA
123429167 5275 Viridiplantae View MSA
121343903 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.20782 0.0 8.10145    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.85642 0.0 7.29442    
cufflinks 0.203513 0.0 0.69881 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 11.8058 0.0 26.6217    

0 Strain