Gene : Eucgr.C03892 E. grandis v2.0
Defline:  (1 of 5) PF00400//PF12265 - WD domain, G-beta repeat (WD40) // Histone-binding protein RBBP4 or subunit C of CAF1 complex (CAF1C_H4-bd) Genomic Order:  2909
Name:  ? Eucgr.C03892 Secondary Identifier:  ? PAC:32036925
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C03892 0.5kb upstream 0.5kb upstream 4803 true Chr03: 73689718-73694520 Eucalyptus grandis
Eucgr.C03892 0.5kb upstream 0.5kb upstream 500 false Chr03: 73689718-73690217 Eucalyptus grandis
Eucgr.C03892 0.5kb downstream 0.5kb downstream 4803 true Chr03: 73690218-73695020 Eucalyptus grandis
Eucgr.C03892 0.5kb downstream 0.5kb downstream 500 false Chr03: 73694521-73695020 Eucalyptus grandis
Eucgr.C03892 1.0kb upstream 1.0kb upstream 5303 true Chr03: 73689218-73694520 Eucalyptus grandis
Eucgr.C03892 1.0kb upstream 1.0kb upstream 1000 false Chr03: 73689218-73690217 Eucalyptus grandis
Eucgr.C03892 1.0kb downstream 1.0kb downstream 5303 true Chr03: 73690218-73695520 Eucalyptus grandis
Eucgr.C03892 1.0kb downstream 1.0kb downstream 1000 false Chr03: 73694521-73695520 Eucalyptus grandis
Eucgr.C03892 2.0kb upstream 2.0kb upstream 6303 true Chr03: 73688218-73694520 Eucalyptus grandis
Eucgr.C03892 2.0kb upstream 2.0kb upstream 2000 false Chr03: 73688218-73690217 Eucalyptus grandis
Eucgr.C03892 2.0kb downstream 2.0kb downstream 6303 true Chr03: 73690218-73696520 Eucalyptus grandis
Eucgr.C03892 2.0kb downstream 2.0kb downstream 2000 false Chr03: 73694521-73696520 Eucalyptus grandis
Eucgr.C03892 5.0kb upstream 5.0kb upstream 9303 true Chr03: 73685218-73694520 Eucalyptus grandis
Eucgr.C03892 5.0kb upstream 5.0kb upstream 5000 false Chr03: 73685218-73690217 Eucalyptus grandis
Eucgr.C03892 5.0kb downstream 5.0kb downstream 9303 true Chr03: 73690218-73699520 Eucalyptus grandis
Eucgr.C03892 5.0kb downstream 5.0kb downstream 5000 false Chr03: 73694521-73699520 Eucalyptus grandis
Eucgr.C03892 10.0kb upstream 10.0kb upstream 14303 true Chr03: 73680218-73694520 Eucalyptus grandis
Eucgr.C03892 10.0kb upstream 10.0kb upstream 10000 false Chr03: 73680218-73690217 Eucalyptus grandis
Eucgr.C03892 10.0kb downstream 10.0kb downstream 14303 true Chr03: 73690218-73704520 Eucalyptus grandis
Eucgr.C03892 10.0kb downstream 10.0kb downstream 10000 false Chr03: 73694521-73704520 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069460 5270 Rosid View MSA
123741946 5271 Pentapetalae View MSA
122794414 5272 Eudicot View MSA
122048731 5273 Angiosperm View MSA
121348301 5274 Embryophyte View MSA
123425749 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.5471 0.0 30.3491    
cufflinks 13.9075 0.0 31.071    
cufflinks 10.2392 0.0 23.2265   Low
cufflinks 11.0121 0.0 24.8136   Low
cufflinks 15.5467 0.0 34.5953   High
cufflinks 14.5358 0.0 32.5079    

0 Strain