Gene : Eucgr.C03788 E. grandis v2.0
Defline:  (1 of 1) PTHR31413:SF2 - AFP HOMOLOG 2 Genomic Order:  3063
Name:  ? Eucgr.C03788 Secondary Identifier:  ? PAC:32037021
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C03788 0.5kb upstream 0.5kb upstream 4586 true Chr03: 76376046-76380631 Eucalyptus grandis
Eucgr.C03788 0.5kb upstream 0.5kb upstream 500 false Chr03: 76376046-76376545 Eucalyptus grandis
Eucgr.C03788 0.5kb downstream 0.5kb downstream 4586 true Chr03: 76376546-76381131 Eucalyptus grandis
Eucgr.C03788 0.5kb downstream 0.5kb downstream 500 false Chr03: 76380632-76381131 Eucalyptus grandis
Eucgr.C03788 1.0kb upstream 1.0kb upstream 5086 true Chr03: 76375546-76380631 Eucalyptus grandis
Eucgr.C03788 1.0kb upstream 1.0kb upstream 1000 false Chr03: 76375546-76376545 Eucalyptus grandis
Eucgr.C03788 1.0kb downstream 1.0kb downstream 5086 true Chr03: 76376546-76381631 Eucalyptus grandis
Eucgr.C03788 1.0kb downstream 1.0kb downstream 1000 false Chr03: 76380632-76381631 Eucalyptus grandis
Eucgr.C03788 2.0kb upstream 2.0kb upstream 6086 true Chr03: 76374546-76380631 Eucalyptus grandis
Eucgr.C03788 2.0kb upstream 2.0kb upstream 2000 false Chr03: 76374546-76376545 Eucalyptus grandis
Eucgr.C03788 2.0kb downstream 2.0kb downstream 6086 true Chr03: 76376546-76382631 Eucalyptus grandis
Eucgr.C03788 2.0kb downstream 2.0kb downstream 2000 false Chr03: 76380632-76382631 Eucalyptus grandis
Eucgr.C03788 5.0kb upstream 5.0kb upstream 9086 true Chr03: 76371546-76380631 Eucalyptus grandis
Eucgr.C03788 5.0kb upstream 5.0kb upstream 5000 false Chr03: 76371546-76376545 Eucalyptus grandis
Eucgr.C03788 5.0kb downstream 5.0kb downstream 9086 true Chr03: 76376546-76385631 Eucalyptus grandis
Eucgr.C03788 5.0kb downstream 5.0kb downstream 5000 false Chr03: 76380632-76385631 Eucalyptus grandis
Eucgr.C03788 10.0kb upstream 10.0kb upstream 14086 true Chr03: 76366546-76380631 Eucalyptus grandis
Eucgr.C03788 10.0kb upstream 10.0kb upstream 10000 false Chr03: 76366546-76376545 Eucalyptus grandis
Eucgr.C03788 10.0kb downstream 10.0kb downstream 14086 true Chr03: 76376546-76390631 Eucalyptus grandis
Eucgr.C03788 10.0kb downstream 10.0kb downstream 10000 false Chr03: 76380632-76390631 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067449 5270 Rosid View MSA
123751299 5271 Pentapetalae View MSA
122788952 5272 Eudicot View MSA
122043015 5273 Angiosperm View MSA
121310063 5274 Embryophyte View MSA
123347659 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.89 0.0 61.2875    
cufflinks 22.0833 0.0 56.4981    
cufflinks 11.0316 0.0 25.3494    
cufflinks 26.6794 0.0 72.2831 High High
cufflinks 9.87843 0.0 26.6134   Low
cufflinks 12.3405 0.0 33.8387    

0 Strain