Gene : Eucgr.D00263 E. grandis v2.0
Defline:  (1 of 2) PTHR10182 - CALCIUM-BINDING PROTEIN 39-RELATED Genomic Order:  200
Name:  ? Eucgr.D00263 Secondary Identifier:  ? PAC:32052123
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D00263 0.5kb upstream 0.5kb upstream 7239 true Chr04: 4423465-4430703 Eucalyptus grandis
Eucgr.D00263 0.5kb upstream 0.5kb upstream 500 false Chr04: 4423465-4423964 Eucalyptus grandis
Eucgr.D00263 0.5kb downstream 0.5kb downstream 7239 true Chr04: 4423965-4431203 Eucalyptus grandis
Eucgr.D00263 0.5kb downstream 0.5kb downstream 500 false Chr04: 4430704-4431203 Eucalyptus grandis
Eucgr.D00263 1.0kb upstream 1.0kb upstream 7739 true Chr04: 4422965-4430703 Eucalyptus grandis
Eucgr.D00263 1.0kb upstream 1.0kb upstream 1000 false Chr04: 4422965-4423964 Eucalyptus grandis
Eucgr.D00263 1.0kb downstream 1.0kb downstream 7739 true Chr04: 4423965-4431703 Eucalyptus grandis
Eucgr.D00263 1.0kb downstream 1.0kb downstream 1000 false Chr04: 4430704-4431703 Eucalyptus grandis
Eucgr.D00263 2.0kb upstream 2.0kb upstream 8739 true Chr04: 4421965-4430703 Eucalyptus grandis
Eucgr.D00263 2.0kb upstream 2.0kb upstream 2000 false Chr04: 4421965-4423964 Eucalyptus grandis
Eucgr.D00263 2.0kb downstream 2.0kb downstream 8739 true Chr04: 4423965-4432703 Eucalyptus grandis
Eucgr.D00263 2.0kb downstream 2.0kb downstream 2000 false Chr04: 4430704-4432703 Eucalyptus grandis
Eucgr.D00263 5.0kb upstream 5.0kb upstream 11739 true Chr04: 4418965-4430703 Eucalyptus grandis
Eucgr.D00263 5.0kb upstream 5.0kb upstream 5000 false Chr04: 4418965-4423964 Eucalyptus grandis
Eucgr.D00263 5.0kb downstream 5.0kb downstream 11739 true Chr04: 4423965-4435703 Eucalyptus grandis
Eucgr.D00263 5.0kb downstream 5.0kb downstream 5000 false Chr04: 4430704-4435703 Eucalyptus grandis
Eucgr.D00263 10.0kb upstream 10.0kb upstream 16739 true Chr04: 4413965-4430703 Eucalyptus grandis
Eucgr.D00263 10.0kb upstream 10.0kb upstream 10000 false Chr04: 4413965-4423964 Eucalyptus grandis
Eucgr.D00263 10.0kb downstream 10.0kb downstream 16739 true Chr04: 4423965-4440703 Eucalyptus grandis
Eucgr.D00263 10.0kb downstream 10.0kb downstream 10000 false Chr04: 4430704-4440703 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069173 5270 Rosid View MSA
123738431 5271 Pentapetalae View MSA
122796867 5272 Eudicot View MSA
122042724 5273 Angiosperm View MSA
121345752 5274 Embryophyte View MSA
123425225 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.2471 0.0 36.2996    
cufflinks 21.4599 0.0 47.5186   High
cufflinks 15.2969 0.0 34.1954    
cufflinks 12.4062 0.0 27.9426   Low
cufflinks 17.8078 0.0 39.6424    
cufflinks 13.8805 0.0 31.3    

0 Strain