Gene : Eucgr.D00076 E. grandis v2.0
Defline:  (1 of 7) KOG1231 - Proteins containing the FAD binding domain Genomic Order:  63
Name:  ? Eucgr.D00076 Secondary Identifier:  ? PAC:32050514
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Ontology Annotation Displayer

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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D00076 0.5kb upstream 0.5kb upstream 2114 true Chr04: 1398037-1400150 Eucalyptus grandis
Eucgr.D00076 0.5kb upstream 0.5kb upstream 500 false Chr04: 1398037-1398536 Eucalyptus grandis
Eucgr.D00076 0.5kb downstream 0.5kb downstream 2114 true Chr04: 1398537-1400650 Eucalyptus grandis
Eucgr.D00076 0.5kb downstream 0.5kb downstream 500 false Chr04: 1400151-1400650 Eucalyptus grandis
Eucgr.D00076 1.0kb upstream 1.0kb upstream 2614 true Chr04: 1397537-1400150 Eucalyptus grandis
Eucgr.D00076 1.0kb upstream 1.0kb upstream 1000 false Chr04: 1397537-1398536 Eucalyptus grandis
Eucgr.D00076 1.0kb downstream 1.0kb downstream 2614 true Chr04: 1398537-1401150 Eucalyptus grandis
Eucgr.D00076 1.0kb downstream 1.0kb downstream 1000 false Chr04: 1400151-1401150 Eucalyptus grandis
Eucgr.D00076 2.0kb upstream 2.0kb upstream 3614 true Chr04: 1396537-1400150 Eucalyptus grandis
Eucgr.D00076 2.0kb upstream 2.0kb upstream 2000 false Chr04: 1396537-1398536 Eucalyptus grandis
Eucgr.D00076 2.0kb downstream 2.0kb downstream 3614 true Chr04: 1398537-1402150 Eucalyptus grandis
Eucgr.D00076 2.0kb downstream 2.0kb downstream 2000 false Chr04: 1400151-1402150 Eucalyptus grandis
Eucgr.D00076 5.0kb upstream 5.0kb upstream 6614 true Chr04: 1393537-1400150 Eucalyptus grandis
Eucgr.D00076 5.0kb upstream 5.0kb upstream 5000 false Chr04: 1393537-1398536 Eucalyptus grandis
Eucgr.D00076 5.0kb downstream 5.0kb downstream 6614 true Chr04: 1398537-1405150 Eucalyptus grandis
Eucgr.D00076 5.0kb downstream 5.0kb downstream 5000 false Chr04: 1400151-1405150 Eucalyptus grandis
Eucgr.D00076 10.0kb upstream 10.0kb upstream 11614 true Chr04: 1388537-1400150 Eucalyptus grandis
Eucgr.D00076 10.0kb upstream 10.0kb upstream 10000 false Chr04: 1388537-1398536 Eucalyptus grandis
Eucgr.D00076 10.0kb downstream 10.0kb downstream 11614 true Chr04: 1398537-1410150 Eucalyptus grandis
Eucgr.D00076 10.0kb downstream 10.0kb downstream 10000 false Chr04: 1400151-1410150 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069535 5270 Rosid View MSA
123750008 5271 Pentapetalae View MSA
122797707 5272 Eudicot View MSA
122049918 5273 Angiosperm View MSA
121351151 5274 Embryophyte View MSA
123426970 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.146629 0.0 0.546375 Low  
cufflinks 8.30971E-5 0.0 0.00881179 Low Low
cufflinks 0.0778751 0.0 0.347606 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.31787 0.0 3.71157    

0 Strain