Gene : Eucgr.D00109 E. grandis v2.0
Defline:  (1 of 4) PTHR22891:SF4 - PROTEIN ARGONAUTE 2-RELATED Genomic Order:  89
Name:  ? Eucgr.D00109 Secondary Identifier:  ? PAC:32052108
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D00109 0.5kb upstream 0.5kb upstream 4107 true Chr04: 1909231-1913337 Eucalyptus grandis
Eucgr.D00109 0.5kb upstream 0.5kb upstream 500 false Chr04: 1909231-1909730 Eucalyptus grandis
Eucgr.D00109 0.5kb downstream 0.5kb downstream 4107 true Chr04: 1909731-1913837 Eucalyptus grandis
Eucgr.D00109 0.5kb downstream 0.5kb downstream 500 false Chr04: 1913338-1913837 Eucalyptus grandis
Eucgr.D00109 1.0kb upstream 1.0kb upstream 4607 true Chr04: 1908731-1913337 Eucalyptus grandis
Eucgr.D00109 1.0kb upstream 1.0kb upstream 1000 false Chr04: 1908731-1909730 Eucalyptus grandis
Eucgr.D00109 1.0kb downstream 1.0kb downstream 4607 true Chr04: 1909731-1914337 Eucalyptus grandis
Eucgr.D00109 1.0kb downstream 1.0kb downstream 1000 false Chr04: 1913338-1914337 Eucalyptus grandis
Eucgr.D00109 2.0kb upstream 2.0kb upstream 5607 true Chr04: 1907731-1913337 Eucalyptus grandis
Eucgr.D00109 2.0kb upstream 2.0kb upstream 2000 false Chr04: 1907731-1909730 Eucalyptus grandis
Eucgr.D00109 2.0kb downstream 2.0kb downstream 5607 true Chr04: 1909731-1915337 Eucalyptus grandis
Eucgr.D00109 2.0kb downstream 2.0kb downstream 2000 false Chr04: 1913338-1915337 Eucalyptus grandis
Eucgr.D00109 5.0kb upstream 5.0kb upstream 8607 true Chr04: 1904731-1913337 Eucalyptus grandis
Eucgr.D00109 5.0kb upstream 5.0kb upstream 5000 false Chr04: 1904731-1909730 Eucalyptus grandis
Eucgr.D00109 5.0kb downstream 5.0kb downstream 8607 true Chr04: 1909731-1918337 Eucalyptus grandis
Eucgr.D00109 5.0kb downstream 5.0kb downstream 5000 false Chr04: 1913338-1918337 Eucalyptus grandis
Eucgr.D00109 10.0kb upstream 10.0kb upstream 13607 true Chr04: 1899731-1913337 Eucalyptus grandis
Eucgr.D00109 10.0kb upstream 10.0kb upstream 10000 false Chr04: 1899731-1909730 Eucalyptus grandis
Eucgr.D00109 10.0kb downstream 10.0kb downstream 13607 true Chr04: 1909731-1923337 Eucalyptus grandis
Eucgr.D00109 10.0kb downstream 10.0kb downstream 10000 false Chr04: 1913338-1923337 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060672 5270 Rosid View MSA
123745241 5271 Pentapetalae View MSA
122793461 5272 Eudicot View MSA
122049484 5273 Angiosperm View MSA
121311429 5274 Embryophyte View MSA
123428465 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.284278 0.0 0.884403 Low  
cufflinks 0.215964 0.0 0.695287 Low  
cufflinks 0.139155 0.0 0.475305 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 3.55898 0.0 8.50629   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain