Gene : Eucgr.D00027 E. grandis v2.0
Defline:  (1 of 6) PF00122//PF00403//PF12710 - E1-E2 ATPase (E1-E2_ATPase) // Heavy-metal-associated domain (HMA) // haloacid dehalogenase-like hydrolase (HAD) Genomic Order:  26
Name:  ? Eucgr.D00027 Secondary Identifier:  ? PAC:32049753
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D00027 0.5kb upstream 0.5kb upstream 8801 true Chr04: 220238-229038 Eucalyptus grandis
Eucgr.D00027 0.5kb upstream 0.5kb upstream 500 false Chr04: 228539-229038 Eucalyptus grandis
Eucgr.D00027 0.5kb downstream 0.5kb downstream 8801 true Chr04: 219738-228538 Eucalyptus grandis
Eucgr.D00027 0.5kb downstream 0.5kb downstream 500 false Chr04: 219738-220237 Eucalyptus grandis
Eucgr.D00027 1.0kb upstream 1.0kb upstream 9301 true Chr04: 220238-229538 Eucalyptus grandis
Eucgr.D00027 1.0kb upstream 1.0kb upstream 1000 false Chr04: 228539-229538 Eucalyptus grandis
Eucgr.D00027 1.0kb downstream 1.0kb downstream 9301 true Chr04: 219238-228538 Eucalyptus grandis
Eucgr.D00027 1.0kb downstream 1.0kb downstream 1000 false Chr04: 219238-220237 Eucalyptus grandis
Eucgr.D00027 2.0kb upstream 2.0kb upstream 10301 true Chr04: 220238-230538 Eucalyptus grandis
Eucgr.D00027 2.0kb upstream 2.0kb upstream 2000 false Chr04: 228539-230538 Eucalyptus grandis
Eucgr.D00027 2.0kb downstream 2.0kb downstream 10301 true Chr04: 218238-228538 Eucalyptus grandis
Eucgr.D00027 2.0kb downstream 2.0kb downstream 2000 false Chr04: 218238-220237 Eucalyptus grandis
Eucgr.D00027 5.0kb upstream 5.0kb upstream 13301 true Chr04: 220238-233538 Eucalyptus grandis
Eucgr.D00027 5.0kb upstream 5.0kb upstream 5000 false Chr04: 228539-233538 Eucalyptus grandis
Eucgr.D00027 5.0kb downstream 5.0kb downstream 13301 true Chr04: 215238-228538 Eucalyptus grandis
Eucgr.D00027 5.0kb downstream 5.0kb downstream 5000 false Chr04: 215238-220237 Eucalyptus grandis
Eucgr.D00027 10.0kb upstream 10.0kb upstream 18301 true Chr04: 220238-238538 Eucalyptus grandis
Eucgr.D00027 10.0kb upstream 10.0kb upstream 10000 false Chr04: 228539-238538 Eucalyptus grandis
Eucgr.D00027 10.0kb downstream 10.0kb downstream 18301 true Chr04: 210238-228538 Eucalyptus grandis
Eucgr.D00027 10.0kb downstream 10.0kb downstream 10000 false Chr04: 210238-220237 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069200 5270 Rosid View MSA
123737302 5271 Pentapetalae View MSA
122788336 5272 Eudicot View MSA
122045942 5273 Angiosperm View MSA
121346195 5274 Embryophyte View MSA
123426796 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.508 0.0 40.9157    
cufflinks 33.1806 0.0 87.1477 High  
cufflinks 37.9182 0.0 86.9071    
cufflinks 24.3627 0.0 56.8443    
cufflinks 31.297 0.0 71.0334    
cufflinks 8.5373 0.0 21.4892   Low

0 Strain