Gene : Eucgr.D00713 E. grandis v2.0
Defline:  (1 of 11) PF05553//PF14364 - Cotton fibre expressed protein (DUF761) // Domain of unknown function (DUF4408) (DUF4408) Genomic Order:  585
Name:  ? Eucgr.D00713 Secondary Identifier:  ? PAC:32051603
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D00713 0.5kb upstream 0.5kb upstream 1802 true Chr04: 13081943-13083744 Eucalyptus grandis
Eucgr.D00713 0.5kb upstream 0.5kb upstream 500 false Chr04: 13081943-13082442 Eucalyptus grandis
Eucgr.D00713 0.5kb downstream 0.5kb downstream 1802 true Chr04: 13082443-13084244 Eucalyptus grandis
Eucgr.D00713 0.5kb downstream 0.5kb downstream 500 false Chr04: 13083745-13084244 Eucalyptus grandis
Eucgr.D00713 1.0kb upstream 1.0kb upstream 2302 true Chr04: 13081443-13083744 Eucalyptus grandis
Eucgr.D00713 1.0kb upstream 1.0kb upstream 1000 false Chr04: 13081443-13082442 Eucalyptus grandis
Eucgr.D00713 1.0kb downstream 1.0kb downstream 2302 true Chr04: 13082443-13084744 Eucalyptus grandis
Eucgr.D00713 1.0kb downstream 1.0kb downstream 1000 false Chr04: 13083745-13084744 Eucalyptus grandis
Eucgr.D00713 2.0kb upstream 2.0kb upstream 3302 true Chr04: 13080443-13083744 Eucalyptus grandis
Eucgr.D00713 2.0kb upstream 2.0kb upstream 2000 false Chr04: 13080443-13082442 Eucalyptus grandis
Eucgr.D00713 2.0kb downstream 2.0kb downstream 3302 true Chr04: 13082443-13085744 Eucalyptus grandis
Eucgr.D00713 2.0kb downstream 2.0kb downstream 2000 false Chr04: 13083745-13085744 Eucalyptus grandis
Eucgr.D00713 5.0kb upstream 5.0kb upstream 6302 true Chr04: 13077443-13083744 Eucalyptus grandis
Eucgr.D00713 5.0kb upstream 5.0kb upstream 5000 false Chr04: 13077443-13082442 Eucalyptus grandis
Eucgr.D00713 5.0kb downstream 5.0kb downstream 6302 true Chr04: 13082443-13088744 Eucalyptus grandis
Eucgr.D00713 5.0kb downstream 5.0kb downstream 5000 false Chr04: 13083745-13088744 Eucalyptus grandis
Eucgr.D00713 10.0kb upstream 10.0kb upstream 11302 true Chr04: 13072443-13083744 Eucalyptus grandis
Eucgr.D00713 10.0kb upstream 10.0kb upstream 10000 false Chr04: 13072443-13082442 Eucalyptus grandis
Eucgr.D00713 10.0kb downstream 10.0kb downstream 11302 true Chr04: 13082443-13093744 Eucalyptus grandis
Eucgr.D00713 10.0kb downstream 10.0kb downstream 10000 false Chr04: 13083745-13093744 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124071784 5270 Rosid View MSA
123749105 5271 Pentapetalae View MSA
122787298 5272 Eudicot View MSA
122041618 5273 Angiosperm View MSA
121309871 5274 Embryophyte View MSA
123347511 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.3607 0.0 27.2872    
cufflinks 0.0152541 0.0 0.172249 Low Low
cufflinks 17.718 0.0 41.5416   High
cufflinks 0.637553 0.0 2.15616    
cufflinks 0.549255 0.0 1.85943 Low  
cufflinks 1.88328 0.0 5.32924    

0 Strain