Gene : Eucgr.D00665 E. grandis v2.0
Defline:  (1 of 162) PF02365 - No apical meristem (NAM) protein (NAM) Genomic Order:  546
Name:  ? Eucgr.D00665 Secondary Identifier:  ? PAC:32050978
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D00665 0.5kb upstream 0.5kb upstream 1993 true Chr04: 12340340-12342332 Eucalyptus grandis
Eucgr.D00665 0.5kb upstream 0.5kb upstream 500 false Chr04: 12340340-12340839 Eucalyptus grandis
Eucgr.D00665 0.5kb downstream 0.5kb downstream 1993 true Chr04: 12340840-12342832 Eucalyptus grandis
Eucgr.D00665 0.5kb downstream 0.5kb downstream 500 false Chr04: 12342333-12342832 Eucalyptus grandis
Eucgr.D00665 1.0kb upstream 1.0kb upstream 2493 true Chr04: 12339840-12342332 Eucalyptus grandis
Eucgr.D00665 1.0kb upstream 1.0kb upstream 1000 false Chr04: 12339840-12340839 Eucalyptus grandis
Eucgr.D00665 1.0kb downstream 1.0kb downstream 2493 true Chr04: 12340840-12343332 Eucalyptus grandis
Eucgr.D00665 1.0kb downstream 1.0kb downstream 1000 false Chr04: 12342333-12343332 Eucalyptus grandis
Eucgr.D00665 2.0kb upstream 2.0kb upstream 3493 true Chr04: 12338840-12342332 Eucalyptus grandis
Eucgr.D00665 2.0kb upstream 2.0kb upstream 2000 false Chr04: 12338840-12340839 Eucalyptus grandis
Eucgr.D00665 2.0kb downstream 2.0kb downstream 3493 true Chr04: 12340840-12344332 Eucalyptus grandis
Eucgr.D00665 2.0kb downstream 2.0kb downstream 2000 false Chr04: 12342333-12344332 Eucalyptus grandis
Eucgr.D00665 5.0kb upstream 5.0kb upstream 6493 true Chr04: 12335840-12342332 Eucalyptus grandis
Eucgr.D00665 5.0kb upstream 5.0kb upstream 5000 false Chr04: 12335840-12340839 Eucalyptus grandis
Eucgr.D00665 5.0kb downstream 5.0kb downstream 6493 true Chr04: 12340840-12347332 Eucalyptus grandis
Eucgr.D00665 5.0kb downstream 5.0kb downstream 5000 false Chr04: 12342333-12347332 Eucalyptus grandis
Eucgr.D00665 10.0kb upstream 10.0kb upstream 11493 true Chr04: 12330840-12342332 Eucalyptus grandis
Eucgr.D00665 10.0kb upstream 10.0kb upstream 10000 false Chr04: 12330840-12340839 Eucalyptus grandis
Eucgr.D00665 10.0kb downstream 10.0kb downstream 11493 true Chr04: 12340840-12352332 Eucalyptus grandis
Eucgr.D00665 10.0kb downstream 10.0kb downstream 10000 false Chr04: 12342333-12352332 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065723 5270 Rosid View MSA
123745074 5271 Pentapetalae View MSA
122796583 5272 Eudicot View MSA
122049237 5273 Angiosperm View MSA
121349958 5274 Embryophyte View MSA
123381516 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.930969 0.0 2.81952    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.286237 0.0 1.01646 Low Low
cufflinks 0.553745 0.0 1.80098    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 3.43169 0.0 9.06077   High

0 Strain