Gene : Eucgr.D00652 E. grandis v2.0
Defline:  (1 of 26) PF02701 - Dof domain, zinc finger (zf-Dof) Genomic Order:  535
Name:  ? Eucgr.D00652 Secondary Identifier:  ? PAC:32051422
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D00652 0.5kb upstream 0.5kb upstream 2265 true Chr04: 12014285-12016549 Eucalyptus grandis
Eucgr.D00652 0.5kb upstream 0.5kb upstream 500 false Chr04: 12014285-12014784 Eucalyptus grandis
Eucgr.D00652 0.5kb downstream 0.5kb downstream 2265 true Chr04: 12014785-12017049 Eucalyptus grandis
Eucgr.D00652 0.5kb downstream 0.5kb downstream 500 false Chr04: 12016550-12017049 Eucalyptus grandis
Eucgr.D00652 1.0kb upstream 1.0kb upstream 2765 true Chr04: 12013785-12016549 Eucalyptus grandis
Eucgr.D00652 1.0kb upstream 1.0kb upstream 1000 false Chr04: 12013785-12014784 Eucalyptus grandis
Eucgr.D00652 1.0kb downstream 1.0kb downstream 2765 true Chr04: 12014785-12017549 Eucalyptus grandis
Eucgr.D00652 1.0kb downstream 1.0kb downstream 1000 false Chr04: 12016550-12017549 Eucalyptus grandis
Eucgr.D00652 2.0kb upstream 2.0kb upstream 3765 true Chr04: 12012785-12016549 Eucalyptus grandis
Eucgr.D00652 2.0kb upstream 2.0kb upstream 2000 false Chr04: 12012785-12014784 Eucalyptus grandis
Eucgr.D00652 2.0kb downstream 2.0kb downstream 3765 true Chr04: 12014785-12018549 Eucalyptus grandis
Eucgr.D00652 2.0kb downstream 2.0kb downstream 2000 false Chr04: 12016550-12018549 Eucalyptus grandis
Eucgr.D00652 5.0kb upstream 5.0kb upstream 6765 true Chr04: 12009785-12016549 Eucalyptus grandis
Eucgr.D00652 5.0kb upstream 5.0kb upstream 5000 false Chr04: 12009785-12014784 Eucalyptus grandis
Eucgr.D00652 5.0kb downstream 5.0kb downstream 6765 true Chr04: 12014785-12021549 Eucalyptus grandis
Eucgr.D00652 5.0kb downstream 5.0kb downstream 5000 false Chr04: 12016550-12021549 Eucalyptus grandis
Eucgr.D00652 10.0kb upstream 10.0kb upstream 11765 true Chr04: 12004785-12016549 Eucalyptus grandis
Eucgr.D00652 10.0kb upstream 10.0kb upstream 10000 false Chr04: 12004785-12014784 Eucalyptus grandis
Eucgr.D00652 10.0kb downstream 10.0kb downstream 11765 true Chr04: 12014785-12026549 Eucalyptus grandis
Eucgr.D00652 10.0kb downstream 10.0kb downstream 10000 false Chr04: 12016550-12026549 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070502 5270 Rosid View MSA
123743613 5271 Pentapetalae View MSA
122796456 5272 Eudicot View MSA
122050733 5273 Angiosperm View MSA
121349903 5274 Embryophyte View MSA
123427226 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.59331 0.0 4.57838    
cufflinks 4.08844 0.0 10.644   High
cufflinks 3.26329 0.0 8.72838    
cufflinks 0.940951 0.0 2.86934   Low
cufflinks 1.21003 0.0 3.56963    
cufflinks 1.92789 0.0 5.45545    

0 Strain