Gene : Eucgr.D00630 E. grandis v2.0
Defline:  (1 of 2) PTHR13308:SF17 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJK13 Genomic Order:  513
Name:  ? Eucgr.D00630 Secondary Identifier:  ? PAC:32051263
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D00630 0.5kb upstream 0.5kb upstream 13074 true Chr04: 11782492-11795565 Eucalyptus grandis
Eucgr.D00630 0.5kb upstream 0.5kb upstream 500 false Chr04: 11795066-11795565 Eucalyptus grandis
Eucgr.D00630 0.5kb downstream 0.5kb downstream 13074 true Chr04: 11781992-11795065 Eucalyptus grandis
Eucgr.D00630 0.5kb downstream 0.5kb downstream 500 false Chr04: 11781992-11782491 Eucalyptus grandis
Eucgr.D00630 1.0kb upstream 1.0kb upstream 13574 true Chr04: 11782492-11796065 Eucalyptus grandis
Eucgr.D00630 1.0kb upstream 1.0kb upstream 1000 false Chr04: 11795066-11796065 Eucalyptus grandis
Eucgr.D00630 1.0kb downstream 1.0kb downstream 13574 true Chr04: 11781492-11795065 Eucalyptus grandis
Eucgr.D00630 1.0kb downstream 1.0kb downstream 1000 false Chr04: 11781492-11782491 Eucalyptus grandis
Eucgr.D00630 2.0kb upstream 2.0kb upstream 14574 true Chr04: 11782492-11797065 Eucalyptus grandis
Eucgr.D00630 2.0kb upstream 2.0kb upstream 2000 false Chr04: 11795066-11797065 Eucalyptus grandis
Eucgr.D00630 2.0kb downstream 2.0kb downstream 14574 true Chr04: 11780492-11795065 Eucalyptus grandis
Eucgr.D00630 2.0kb downstream 2.0kb downstream 2000 false Chr04: 11780492-11782491 Eucalyptus grandis
Eucgr.D00630 5.0kb upstream 5.0kb upstream 17574 true Chr04: 11782492-11800065 Eucalyptus grandis
Eucgr.D00630 5.0kb upstream 5.0kb upstream 5000 false Chr04: 11795066-11800065 Eucalyptus grandis
Eucgr.D00630 5.0kb downstream 5.0kb downstream 17574 true Chr04: 11777492-11795065 Eucalyptus grandis
Eucgr.D00630 5.0kb downstream 5.0kb downstream 5000 false Chr04: 11777492-11782491 Eucalyptus grandis
Eucgr.D00630 10.0kb upstream 10.0kb upstream 22574 true Chr04: 11782492-11805065 Eucalyptus grandis
Eucgr.D00630 10.0kb upstream 10.0kb upstream 10000 false Chr04: 11795066-11805065 Eucalyptus grandis
Eucgr.D00630 10.0kb downstream 10.0kb downstream 22574 true Chr04: 11772492-11795065 Eucalyptus grandis
Eucgr.D00630 10.0kb downstream 10.0kb downstream 10000 false Chr04: 11772492-11782491 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066526 5270 Rosid View MSA
123744370 5271 Pentapetalae View MSA
122786444 5272 Eudicot View MSA
122050833 5273 Angiosperm View MSA
121348139 5274 Embryophyte View MSA
123428671 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.3672 0.0 25.5728    
cufflinks 17.253 0.0 38.2399    
cufflinks 5.83669 0.0 13.7113   Low
cufflinks 30.4801 0.0 67.6256   High
cufflinks 16.2094 0.0 35.9768    
cufflinks 5.83137 0.0 13.8114   Low

0 Strain