Gene : Eucgr.D00590 E. grandis v2.0
Defline:  (1 of 3) PTHR10751//PTHR10751:SF44 - GUANYLATE BINDING PROTEIN Genomic Order:  475
Name:  ? Eucgr.D00590 Secondary Identifier:  ? PAC:32050355
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D00590 0.5kb upstream 0.5kb upstream 8211 true Chr04: 11108051-11116261 Eucalyptus grandis
Eucgr.D00590 0.5kb upstream 0.5kb upstream 500 false Chr04: 11108051-11108550 Eucalyptus grandis
Eucgr.D00590 0.5kb downstream 0.5kb downstream 8211 true Chr04: 11108551-11116761 Eucalyptus grandis
Eucgr.D00590 0.5kb downstream 0.5kb downstream 500 false Chr04: 11116262-11116761 Eucalyptus grandis
Eucgr.D00590 1.0kb upstream 1.0kb upstream 8711 true Chr04: 11107551-11116261 Eucalyptus grandis
Eucgr.D00590 1.0kb upstream 1.0kb upstream 1000 false Chr04: 11107551-11108550 Eucalyptus grandis
Eucgr.D00590 1.0kb downstream 1.0kb downstream 8711 true Chr04: 11108551-11117261 Eucalyptus grandis
Eucgr.D00590 1.0kb downstream 1.0kb downstream 1000 false Chr04: 11116262-11117261 Eucalyptus grandis
Eucgr.D00590 2.0kb upstream 2.0kb upstream 9711 true Chr04: 11106551-11116261 Eucalyptus grandis
Eucgr.D00590 2.0kb upstream 2.0kb upstream 2000 false Chr04: 11106551-11108550 Eucalyptus grandis
Eucgr.D00590 2.0kb downstream 2.0kb downstream 9711 true Chr04: 11108551-11118261 Eucalyptus grandis
Eucgr.D00590 2.0kb downstream 2.0kb downstream 2000 false Chr04: 11116262-11118261 Eucalyptus grandis
Eucgr.D00590 5.0kb upstream 5.0kb upstream 12711 true Chr04: 11103551-11116261 Eucalyptus grandis
Eucgr.D00590 5.0kb upstream 5.0kb upstream 5000 false Chr04: 11103551-11108550 Eucalyptus grandis
Eucgr.D00590 5.0kb downstream 5.0kb downstream 12711 true Chr04: 11108551-11121261 Eucalyptus grandis
Eucgr.D00590 5.0kb downstream 5.0kb downstream 5000 false Chr04: 11116262-11121261 Eucalyptus grandis
Eucgr.D00590 10.0kb upstream 10.0kb upstream 17711 true Chr04: 11098551-11116261 Eucalyptus grandis
Eucgr.D00590 10.0kb upstream 10.0kb upstream 10000 false Chr04: 11098551-11108550 Eucalyptus grandis
Eucgr.D00590 10.0kb downstream 10.0kb downstream 17711 true Chr04: 11108551-11126261 Eucalyptus grandis
Eucgr.D00590 10.0kb downstream 10.0kb downstream 10000 false Chr04: 11116262-11126261 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124050265 5270 Rosid View MSA
123747703 5271 Pentapetalae View MSA
122791372 5272 Eudicot View MSA
122041640 5273 Angiosperm View MSA
121347884 5274 Embryophyte View MSA
123426529 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.7684 0.0 32.6783    
cufflinks 11.5708 0.0 25.59    
cufflinks 15.4783 0.0 34.2854    
cufflinks 15.3919 0.0 34.1118    
cufflinks 12.3877 0.0 27.3949    
cufflinks 8.31397 0.0 18.5254   Low

0 Strain