Gene : Eucgr.D00609 E. grandis v2.0
Defline:  (1 of 4) PTHR13718 - RIBOSOMAL S SUBUNIT Genomic Order:  493
Name:  ? Eucgr.D00609 Secondary Identifier:  ? PAC:32051378
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D00609 0.5kb upstream 0.5kb upstream 3505 true Chr04: 11437159-11440663 Eucalyptus grandis
Eucgr.D00609 0.5kb upstream 0.5kb upstream 500 false Chr04: 11437159-11437658 Eucalyptus grandis
Eucgr.D00609 0.5kb downstream 0.5kb downstream 3505 true Chr04: 11437659-11441163 Eucalyptus grandis
Eucgr.D00609 0.5kb downstream 0.5kb downstream 500 false Chr04: 11440664-11441163 Eucalyptus grandis
Eucgr.D00609 1.0kb upstream 1.0kb upstream 4005 true Chr04: 11436659-11440663 Eucalyptus grandis
Eucgr.D00609 1.0kb upstream 1.0kb upstream 1000 false Chr04: 11436659-11437658 Eucalyptus grandis
Eucgr.D00609 1.0kb downstream 1.0kb downstream 4005 true Chr04: 11437659-11441663 Eucalyptus grandis
Eucgr.D00609 1.0kb downstream 1.0kb downstream 1000 false Chr04: 11440664-11441663 Eucalyptus grandis
Eucgr.D00609 2.0kb upstream 2.0kb upstream 5005 true Chr04: 11435659-11440663 Eucalyptus grandis
Eucgr.D00609 2.0kb upstream 2.0kb upstream 2000 false Chr04: 11435659-11437658 Eucalyptus grandis
Eucgr.D00609 2.0kb downstream 2.0kb downstream 5005 true Chr04: 11437659-11442663 Eucalyptus grandis
Eucgr.D00609 2.0kb downstream 2.0kb downstream 2000 false Chr04: 11440664-11442663 Eucalyptus grandis
Eucgr.D00609 5.0kb upstream 5.0kb upstream 8005 true Chr04: 11432659-11440663 Eucalyptus grandis
Eucgr.D00609 5.0kb upstream 5.0kb upstream 5000 false Chr04: 11432659-11437658 Eucalyptus grandis
Eucgr.D00609 5.0kb downstream 5.0kb downstream 8005 true Chr04: 11437659-11445663 Eucalyptus grandis
Eucgr.D00609 5.0kb downstream 5.0kb downstream 5000 false Chr04: 11440664-11445663 Eucalyptus grandis
Eucgr.D00609 10.0kb upstream 10.0kb upstream 13005 true Chr04: 11427659-11440663 Eucalyptus grandis
Eucgr.D00609 10.0kb upstream 10.0kb upstream 10000 false Chr04: 11427659-11437658 Eucalyptus grandis
Eucgr.D00609 10.0kb downstream 10.0kb downstream 13005 true Chr04: 11437659-11450663 Eucalyptus grandis
Eucgr.D00609 10.0kb downstream 10.0kb downstream 10000 false Chr04: 11440664-11450663 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064887 5270 Rosid View MSA
123746932 5271 Pentapetalae View MSA
122792808 5272 Eudicot View MSA
122046027 5273 Angiosperm View MSA
121345659 5274 Embryophyte View MSA
123426333 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 46.0982 0.0 120.124 High  
cufflinks 4.52221 0.0 12.4836    
cufflinks 17.6301 0.0 50.3576    
cufflinks 2.65662 0.0 7.73339   Low
cufflinks 3.74028 0.0 10.4487    
cufflinks 86.8458 0.0 226.971 High High

0 Strain