Gene : Eucgr.D00435 E. grandis v2.0
Defline:  (1 of 1) PTHR11669:SF16 - PROTEIN STICHEL-LIKE 3-RELATED Genomic Order:  352
Name:  ? Eucgr.D00435 Secondary Identifier:  ? PAC:32051009
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D00435 0.5kb upstream 0.5kb upstream 10534 true Chr04: 8112897-8123430 Eucalyptus grandis
Eucgr.D00435 0.5kb upstream 0.5kb upstream 500 false Chr04: 8122931-8123430 Eucalyptus grandis
Eucgr.D00435 0.5kb downstream 0.5kb downstream 10534 true Chr04: 8112397-8122930 Eucalyptus grandis
Eucgr.D00435 0.5kb downstream 0.5kb downstream 500 false Chr04: 8112397-8112896 Eucalyptus grandis
Eucgr.D00435 1.0kb upstream 1.0kb upstream 11034 true Chr04: 8112897-8123930 Eucalyptus grandis
Eucgr.D00435 1.0kb upstream 1.0kb upstream 1000 false Chr04: 8122931-8123930 Eucalyptus grandis
Eucgr.D00435 1.0kb downstream 1.0kb downstream 11034 true Chr04: 8111897-8122930 Eucalyptus grandis
Eucgr.D00435 1.0kb downstream 1.0kb downstream 1000 false Chr04: 8111897-8112896 Eucalyptus grandis
Eucgr.D00435 2.0kb upstream 2.0kb upstream 12034 true Chr04: 8112897-8124930 Eucalyptus grandis
Eucgr.D00435 2.0kb upstream 2.0kb upstream 2000 false Chr04: 8122931-8124930 Eucalyptus grandis
Eucgr.D00435 2.0kb downstream 2.0kb downstream 12034 true Chr04: 8110897-8122930 Eucalyptus grandis
Eucgr.D00435 2.0kb downstream 2.0kb downstream 2000 false Chr04: 8110897-8112896 Eucalyptus grandis
Eucgr.D00435 5.0kb upstream 5.0kb upstream 15034 true Chr04: 8112897-8127930 Eucalyptus grandis
Eucgr.D00435 5.0kb upstream 5.0kb upstream 5000 false Chr04: 8122931-8127930 Eucalyptus grandis
Eucgr.D00435 5.0kb downstream 5.0kb downstream 15034 true Chr04: 8107897-8122930 Eucalyptus grandis
Eucgr.D00435 5.0kb downstream 5.0kb downstream 5000 false Chr04: 8107897-8112896 Eucalyptus grandis
Eucgr.D00435 10.0kb upstream 10.0kb upstream 20034 true Chr04: 8112897-8132930 Eucalyptus grandis
Eucgr.D00435 10.0kb upstream 10.0kb upstream 10000 false Chr04: 8122931-8132930 Eucalyptus grandis
Eucgr.D00435 10.0kb downstream 10.0kb downstream 20034 true Chr04: 8102897-8122930 Eucalyptus grandis
Eucgr.D00435 10.0kb downstream 10.0kb downstream 10000 false Chr04: 8102897-8112896 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040922 5273 Angiosperm View MSA
124064207 5270 Rosid View MSA
123751329 5271 Pentapetalae View MSA
122792829 5272 Eudicot View MSA
121349902 5274 Embryophyte View MSA
123381492 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.48358 0.0 8.1701    
cufflinks 2.59816 0.0 6.22627    
cufflinks 4.87755 0.0 11.1114   High
cufflinks 1.02216 0.0 2.681   Low
cufflinks 3.25918 0.0 7.65676    
cufflinks 1.1002 0.0 2.90488   Low

0 Strain