Gene : Eucgr.D01029 E. grandis v2.0
Defline:  (1 of 1) PTHR13768:SF2 - GAMMA-SOLUBLE NSF ATTACHMENT PROTEIN Genomic Order:  1021
Name:  ? Eucgr.D01029 Secondary Identifier:  ? PAC:32052044
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D01029 0.5kb upstream 0.5kb upstream 7518 true Chr04: 22206432-22213949 Eucalyptus grandis
Eucgr.D01029 0.5kb upstream 0.5kb upstream 500 false Chr04: 22206432-22206931 Eucalyptus grandis
Eucgr.D01029 0.5kb downstream 0.5kb downstream 7518 true Chr04: 22206932-22214449 Eucalyptus grandis
Eucgr.D01029 0.5kb downstream 0.5kb downstream 500 false Chr04: 22213950-22214449 Eucalyptus grandis
Eucgr.D01029 1.0kb upstream 1.0kb upstream 8018 true Chr04: 22205932-22213949 Eucalyptus grandis
Eucgr.D01029 1.0kb upstream 1.0kb upstream 1000 false Chr04: 22205932-22206931 Eucalyptus grandis
Eucgr.D01029 1.0kb downstream 1.0kb downstream 8018 true Chr04: 22206932-22214949 Eucalyptus grandis
Eucgr.D01029 1.0kb downstream 1.0kb downstream 1000 false Chr04: 22213950-22214949 Eucalyptus grandis
Eucgr.D01029 2.0kb upstream 2.0kb upstream 9018 true Chr04: 22204932-22213949 Eucalyptus grandis
Eucgr.D01029 2.0kb upstream 2.0kb upstream 2000 false Chr04: 22204932-22206931 Eucalyptus grandis
Eucgr.D01029 2.0kb downstream 2.0kb downstream 9018 true Chr04: 22206932-22215949 Eucalyptus grandis
Eucgr.D01029 2.0kb downstream 2.0kb downstream 2000 false Chr04: 22213950-22215949 Eucalyptus grandis
Eucgr.D01029 5.0kb upstream 5.0kb upstream 12018 true Chr04: 22201932-22213949 Eucalyptus grandis
Eucgr.D01029 5.0kb upstream 5.0kb upstream 5000 false Chr04: 22201932-22206931 Eucalyptus grandis
Eucgr.D01029 5.0kb downstream 5.0kb downstream 12018 true Chr04: 22206932-22218949 Eucalyptus grandis
Eucgr.D01029 5.0kb downstream 5.0kb downstream 5000 false Chr04: 22213950-22218949 Eucalyptus grandis
Eucgr.D01029 10.0kb upstream 10.0kb upstream 17018 true Chr04: 22196932-22213949 Eucalyptus grandis
Eucgr.D01029 10.0kb upstream 10.0kb upstream 10000 false Chr04: 22196932-22206931 Eucalyptus grandis
Eucgr.D01029 10.0kb downstream 10.0kb downstream 17018 true Chr04: 22206932-22223949 Eucalyptus grandis
Eucgr.D01029 10.0kb downstream 10.0kb downstream 10000 false Chr04: 22213950-22223949 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041438 5273 Angiosperm View MSA
124066430 5270 Rosid View MSA
123746978 5271 Pentapetalae View MSA
122787985 5272 Eudicot View MSA
121344977 5274 Embryophyte View MSA
123426190 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.3828 0.0 53.4132    
cufflinks 88.6672 0.0 240.45 High  
cufflinks 18.5295 0.0 54.1847    
cufflinks 115.922 0.0 330.228 High High
cufflinks 54.4447 0.0 147.185 High  
cufflinks 20.7438 0.0 57.1991    

0 Strain