Gene : Eucgr.D00945 E. grandis v2.0
Defline:  (1 of 1) PTHR21297:SF2 - DNA-DIRECTED RNA POLYMERASES IV AND V SUBUNIT 4 Genomic Order:  953
Name:  ? Eucgr.D00945 Secondary Identifier:  ? PAC:32049822
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D00945 0.5kb upstream 0.5kb upstream 3820 true Chr04: 20860615-20864434 Eucalyptus grandis
Eucgr.D00945 0.5kb upstream 0.5kb upstream 500 false Chr04: 20860615-20861114 Eucalyptus grandis
Eucgr.D00945 0.5kb downstream 0.5kb downstream 3820 true Chr04: 20861115-20864934 Eucalyptus grandis
Eucgr.D00945 0.5kb downstream 0.5kb downstream 500 false Chr04: 20864435-20864934 Eucalyptus grandis
Eucgr.D00945 1.0kb upstream 1.0kb upstream 4320 true Chr04: 20860115-20864434 Eucalyptus grandis
Eucgr.D00945 1.0kb upstream 1.0kb upstream 1000 false Chr04: 20860115-20861114 Eucalyptus grandis
Eucgr.D00945 1.0kb downstream 1.0kb downstream 4320 true Chr04: 20861115-20865434 Eucalyptus grandis
Eucgr.D00945 1.0kb downstream 1.0kb downstream 1000 false Chr04: 20864435-20865434 Eucalyptus grandis
Eucgr.D00945 2.0kb upstream 2.0kb upstream 5320 true Chr04: 20859115-20864434 Eucalyptus grandis
Eucgr.D00945 2.0kb upstream 2.0kb upstream 2000 false Chr04: 20859115-20861114 Eucalyptus grandis
Eucgr.D00945 2.0kb downstream 2.0kb downstream 5320 true Chr04: 20861115-20866434 Eucalyptus grandis
Eucgr.D00945 2.0kb downstream 2.0kb downstream 2000 false Chr04: 20864435-20866434 Eucalyptus grandis
Eucgr.D00945 5.0kb upstream 5.0kb upstream 8320 true Chr04: 20856115-20864434 Eucalyptus grandis
Eucgr.D00945 5.0kb upstream 5.0kb upstream 5000 false Chr04: 20856115-20861114 Eucalyptus grandis
Eucgr.D00945 5.0kb downstream 5.0kb downstream 8320 true Chr04: 20861115-20869434 Eucalyptus grandis
Eucgr.D00945 5.0kb downstream 5.0kb downstream 5000 false Chr04: 20864435-20869434 Eucalyptus grandis
Eucgr.D00945 10.0kb upstream 10.0kb upstream 13320 true Chr04: 20851115-20864434 Eucalyptus grandis
Eucgr.D00945 10.0kb upstream 10.0kb upstream 10000 false Chr04: 20851115-20861114 Eucalyptus grandis
Eucgr.D00945 10.0kb downstream 10.0kb downstream 13320 true Chr04: 20861115-20874434 Eucalyptus grandis
Eucgr.D00945 10.0kb downstream 10.0kb downstream 10000 false Chr04: 20864435-20874434 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061465 5270 Rosid View MSA
123744062 5271 Pentapetalae View MSA
122792383 5272 Eudicot View MSA
122048092 5273 Angiosperm View MSA
123429036 5275 Viridiplantae View MSA
121349369 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.0194 0.0 55.1011    
cufflinks 21.9417 0.0 55.6184    
cufflinks 23.7299 0.0 60.3672    
cufflinks 27.0615 0.0 67.4281   High
cufflinks 19.968 0.0 49.033    
cufflinks 13.5525 0.0 31.402   Low

0 Strain