Gene : Eucgr.D00944 E. grandis v2.0
Defline:  (1 of 28) PF03000 - NPH3 family (NPH3) Genomic Order:  952
Name:  ? Eucgr.D00944 Secondary Identifier:  ? PAC:32050621
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D00944 0.5kb upstream 0.5kb upstream 6814 true Chr04: 20853681-20860494 Eucalyptus grandis
Eucgr.D00944 0.5kb upstream 0.5kb upstream 500 false Chr04: 20853681-20854180 Eucalyptus grandis
Eucgr.D00944 0.5kb downstream 0.5kb downstream 6814 true Chr04: 20854181-20860994 Eucalyptus grandis
Eucgr.D00944 0.5kb downstream 0.5kb downstream 500 false Chr04: 20860495-20860994 Eucalyptus grandis
Eucgr.D00944 1.0kb upstream 1.0kb upstream 7314 true Chr04: 20853181-20860494 Eucalyptus grandis
Eucgr.D00944 1.0kb upstream 1.0kb upstream 1000 false Chr04: 20853181-20854180 Eucalyptus grandis
Eucgr.D00944 1.0kb downstream 1.0kb downstream 7314 true Chr04: 20854181-20861494 Eucalyptus grandis
Eucgr.D00944 1.0kb downstream 1.0kb downstream 1000 false Chr04: 20860495-20861494 Eucalyptus grandis
Eucgr.D00944 2.0kb upstream 2.0kb upstream 8314 true Chr04: 20852181-20860494 Eucalyptus grandis
Eucgr.D00944 2.0kb upstream 2.0kb upstream 2000 false Chr04: 20852181-20854180 Eucalyptus grandis
Eucgr.D00944 2.0kb downstream 2.0kb downstream 8314 true Chr04: 20854181-20862494 Eucalyptus grandis
Eucgr.D00944 2.0kb downstream 2.0kb downstream 2000 false Chr04: 20860495-20862494 Eucalyptus grandis
Eucgr.D00944 5.0kb upstream 5.0kb upstream 11314 true Chr04: 20849181-20860494 Eucalyptus grandis
Eucgr.D00944 5.0kb upstream 5.0kb upstream 5000 false Chr04: 20849181-20854180 Eucalyptus grandis
Eucgr.D00944 5.0kb downstream 5.0kb downstream 11314 true Chr04: 20854181-20865494 Eucalyptus grandis
Eucgr.D00944 5.0kb downstream 5.0kb downstream 5000 false Chr04: 20860495-20865494 Eucalyptus grandis
Eucgr.D00944 10.0kb upstream 10.0kb upstream 16314 true Chr04: 20844181-20860494 Eucalyptus grandis
Eucgr.D00944 10.0kb upstream 10.0kb upstream 10000 false Chr04: 20844181-20854180 Eucalyptus grandis
Eucgr.D00944 10.0kb downstream 10.0kb downstream 16314 true Chr04: 20854181-20870494 Eucalyptus grandis
Eucgr.D00944 10.0kb downstream 10.0kb downstream 10000 false Chr04: 20860495-20870494 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026454 5273 Angiosperm View MSA
124067148 5270 Rosid View MSA
123737998 5271 Pentapetalae View MSA
122789015 5272 Eudicot View MSA
121296339 5274 Embryophyte View MSA
123334520 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.798763 0.0 2.53881    
cufflinks 2.93725 0.0 9.77391    
cufflinks 1.84141 0.0 4.85943    
cufflinks 4.88394 0.0 11.3352    
cufflinks 13.1981 0.0 29.6952   High
cufflinks 0.468119 0.0 1.61836 Low Low

0 Strain