Gene : Eucgr.D01851 E. grandis v2.0
Defline:  (1 of 1) PTHR10694:SF8 - LYSINE-SPECIFIC DEMETHYLASE LID Genomic Order:  1514
Name:  ? Eucgr.D01851 Secondary Identifier:  ? PAC:32051430
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D01851 0.5kb upstream 0.5kb upstream 22875 true Chr04: 32019734-32042608 Eucalyptus grandis
Eucgr.D01851 0.5kb upstream 0.5kb upstream 500 false Chr04: 32019734-32020233 Eucalyptus grandis
Eucgr.D01851 0.5kb downstream 0.5kb downstream 22875 true Chr04: 32020234-32043108 Eucalyptus grandis
Eucgr.D01851 0.5kb downstream 0.5kb downstream 500 false Chr04: 32042609-32043108 Eucalyptus grandis
Eucgr.D01851 1.0kb upstream 1.0kb upstream 23375 true Chr04: 32019234-32042608 Eucalyptus grandis
Eucgr.D01851 1.0kb upstream 1.0kb upstream 1000 false Chr04: 32019234-32020233 Eucalyptus grandis
Eucgr.D01851 1.0kb downstream 1.0kb downstream 23375 true Chr04: 32020234-32043608 Eucalyptus grandis
Eucgr.D01851 1.0kb downstream 1.0kb downstream 1000 false Chr04: 32042609-32043608 Eucalyptus grandis
Eucgr.D01851 2.0kb upstream 2.0kb upstream 24375 true Chr04: 32018234-32042608 Eucalyptus grandis
Eucgr.D01851 2.0kb upstream 2.0kb upstream 2000 false Chr04: 32018234-32020233 Eucalyptus grandis
Eucgr.D01851 2.0kb downstream 2.0kb downstream 24375 true Chr04: 32020234-32044608 Eucalyptus grandis
Eucgr.D01851 2.0kb downstream 2.0kb downstream 2000 false Chr04: 32042609-32044608 Eucalyptus grandis
Eucgr.D01851 5.0kb upstream 5.0kb upstream 27375 true Chr04: 32015234-32042608 Eucalyptus grandis
Eucgr.D01851 5.0kb upstream 5.0kb upstream 5000 false Chr04: 32015234-32020233 Eucalyptus grandis
Eucgr.D01851 5.0kb downstream 5.0kb downstream 27375 true Chr04: 32020234-32047608 Eucalyptus grandis
Eucgr.D01851 5.0kb downstream 5.0kb downstream 5000 false Chr04: 32042609-32047608 Eucalyptus grandis
Eucgr.D01851 10.0kb upstream 10.0kb upstream 32375 true Chr04: 32010234-32042608 Eucalyptus grandis
Eucgr.D01851 10.0kb upstream 10.0kb upstream 10000 false Chr04: 32010234-32020233 Eucalyptus grandis
Eucgr.D01851 10.0kb downstream 10.0kb downstream 32375 true Chr04: 32020234-32052608 Eucalyptus grandis
Eucgr.D01851 10.0kb downstream 10.0kb downstream 10000 false Chr04: 32042609-32052608 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062119 5270 Rosid View MSA
123738333 5271 Pentapetalae View MSA
122792222 5272 Eudicot View MSA
122044842 5273 Angiosperm View MSA
121344507 5274 Embryophyte View MSA
123426516 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.5683 0.0 28.8605   Low
cufflinks 12.5203 0.0 28.9258   Low
cufflinks 15.3754 0.0 36.3248    
cufflinks 15.9524 0.0 38.0602    
cufflinks 16.7322 0.0 39.9184    
cufflinks 16.9197 0.0 40.0129    

0 Strain