Gene : Eucgr.D01795 E. grandis v2.0
Defline:  (1 of 2) PTHR10794:SF58 - CAAX AMINO TERMINAL PROTEASE FAMILY PROTEIN Genomic Order:  1462
Name:  ? Eucgr.D01795 Secondary Identifier:  ? PAC:32050883
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D01795 0.5kb upstream 0.5kb upstream 4113 true Chr04: 31459487-31463599 Eucalyptus grandis
Eucgr.D01795 0.5kb upstream 0.5kb upstream 500 false Chr04: 31459487-31459986 Eucalyptus grandis
Eucgr.D01795 0.5kb downstream 0.5kb downstream 4113 true Chr04: 31459987-31464099 Eucalyptus grandis
Eucgr.D01795 0.5kb downstream 0.5kb downstream 500 false Chr04: 31463600-31464099 Eucalyptus grandis
Eucgr.D01795 1.0kb upstream 1.0kb upstream 4613 true Chr04: 31458987-31463599 Eucalyptus grandis
Eucgr.D01795 1.0kb upstream 1.0kb upstream 1000 false Chr04: 31458987-31459986 Eucalyptus grandis
Eucgr.D01795 1.0kb downstream 1.0kb downstream 4613 true Chr04: 31459987-31464599 Eucalyptus grandis
Eucgr.D01795 1.0kb downstream 1.0kb downstream 1000 false Chr04: 31463600-31464599 Eucalyptus grandis
Eucgr.D01795 2.0kb upstream 2.0kb upstream 5613 true Chr04: 31457987-31463599 Eucalyptus grandis
Eucgr.D01795 2.0kb upstream 2.0kb upstream 2000 false Chr04: 31457987-31459986 Eucalyptus grandis
Eucgr.D01795 2.0kb downstream 2.0kb downstream 5613 true Chr04: 31459987-31465599 Eucalyptus grandis
Eucgr.D01795 2.0kb downstream 2.0kb downstream 2000 false Chr04: 31463600-31465599 Eucalyptus grandis
Eucgr.D01795 5.0kb upstream 5.0kb upstream 8613 true Chr04: 31454987-31463599 Eucalyptus grandis
Eucgr.D01795 5.0kb upstream 5.0kb upstream 5000 false Chr04: 31454987-31459986 Eucalyptus grandis
Eucgr.D01795 5.0kb downstream 5.0kb downstream 8613 true Chr04: 31459987-31468599 Eucalyptus grandis
Eucgr.D01795 5.0kb downstream 5.0kb downstream 5000 false Chr04: 31463600-31468599 Eucalyptus grandis
Eucgr.D01795 10.0kb upstream 10.0kb upstream 13613 true Chr04: 31449987-31463599 Eucalyptus grandis
Eucgr.D01795 10.0kb upstream 10.0kb upstream 10000 false Chr04: 31449987-31459986 Eucalyptus grandis
Eucgr.D01795 10.0kb downstream 10.0kb downstream 13613 true Chr04: 31459987-31473599 Eucalyptus grandis
Eucgr.D01795 10.0kb downstream 10.0kb downstream 10000 false Chr04: 31463600-31473599 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068174 5270 Rosid View MSA
123739909 5271 Pentapetalae View MSA
122789492 5272 Eudicot View MSA
122042662 5273 Angiosperm View MSA
121345279 5274 Embryophyte View MSA
123428279 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.073 0.0 56.964    
cufflinks 29.0245 0.0 65.3262    
cufflinks 24.9452 0.0 56.4628    
cufflinks 25.9037 0.0 58.2704    
cufflinks 14.05 0.0 32.2435   Low
cufflinks 19.2288 0.0 44.4812    

0 Strain