Gene : Eucgr.D01799 E. grandis v2.0
Defline:  (1 of 1) PTHR33284:SF1 - RIBOSOMAL L25/TL5/CTC N-TERMINAL 5S RRNA BINDING DOMAIN-CONTAINING PROTEIN Genomic Order:  1466
Name:  ? Eucgr.D01799 Secondary Identifier:  ? PAC:32051580
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D01799 0.5kb upstream 0.5kb upstream 4033 true Chr04: 31478609-31482641 Eucalyptus grandis
Eucgr.D01799 0.5kb upstream 0.5kb upstream 500 false Chr04: 31478609-31479108 Eucalyptus grandis
Eucgr.D01799 0.5kb downstream 0.5kb downstream 4033 true Chr04: 31479109-31483141 Eucalyptus grandis
Eucgr.D01799 0.5kb downstream 0.5kb downstream 500 false Chr04: 31482642-31483141 Eucalyptus grandis
Eucgr.D01799 1.0kb upstream 1.0kb upstream 4533 true Chr04: 31478109-31482641 Eucalyptus grandis
Eucgr.D01799 1.0kb upstream 1.0kb upstream 1000 false Chr04: 31478109-31479108 Eucalyptus grandis
Eucgr.D01799 1.0kb downstream 1.0kb downstream 4533 true Chr04: 31479109-31483641 Eucalyptus grandis
Eucgr.D01799 1.0kb downstream 1.0kb downstream 1000 false Chr04: 31482642-31483641 Eucalyptus grandis
Eucgr.D01799 2.0kb upstream 2.0kb upstream 5533 true Chr04: 31477109-31482641 Eucalyptus grandis
Eucgr.D01799 2.0kb upstream 2.0kb upstream 2000 false Chr04: 31477109-31479108 Eucalyptus grandis
Eucgr.D01799 2.0kb downstream 2.0kb downstream 5533 true Chr04: 31479109-31484641 Eucalyptus grandis
Eucgr.D01799 2.0kb downstream 2.0kb downstream 2000 false Chr04: 31482642-31484641 Eucalyptus grandis
Eucgr.D01799 5.0kb upstream 5.0kb upstream 8533 true Chr04: 31474109-31482641 Eucalyptus grandis
Eucgr.D01799 5.0kb upstream 5.0kb upstream 5000 false Chr04: 31474109-31479108 Eucalyptus grandis
Eucgr.D01799 5.0kb downstream 5.0kb downstream 8533 true Chr04: 31479109-31487641 Eucalyptus grandis
Eucgr.D01799 5.0kb downstream 5.0kb downstream 5000 false Chr04: 31482642-31487641 Eucalyptus grandis
Eucgr.D01799 10.0kb upstream 10.0kb upstream 13533 true Chr04: 31469109-31482641 Eucalyptus grandis
Eucgr.D01799 10.0kb upstream 10.0kb upstream 10000 false Chr04: 31469109-31479108 Eucalyptus grandis
Eucgr.D01799 10.0kb downstream 10.0kb downstream 13533 true Chr04: 31479109-31492641 Eucalyptus grandis
Eucgr.D01799 10.0kb downstream 10.0kb downstream 10000 false Chr04: 31482642-31492641 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062283 5270 Rosid View MSA
123743591 5271 Pentapetalae View MSA
122793831 5272 Eudicot View MSA
122044337 5273 Angiosperm View MSA
121344036 5274 Embryophyte View MSA
123426023 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.92984 0.0 18.9291    
cufflinks 3.76843 0.0 9.6825   Low
cufflinks 7.14652 0.0 17.3162    
cufflinks 5.91492 0.0 14.5793    
cufflinks 6.37567 0.0 15.5104    
cufflinks 7.80012 0.0 18.5718    

0 Strain