Gene : Eucgr.D01786 E. grandis v2.0
Defline:  (1 of 1) PTHR31071:SF9 - INTRACELLULAR PROTEIN TRANSPORT PROTEIN USO1-LIKE PROTEIN Genomic Order:  1453
Name:  ? Eucgr.D01786 Secondary Identifier:  ? PAC:32049486
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D01786 0.5kb upstream 0.5kb upstream 4418 true Chr04: 31383104-31387521 Eucalyptus grandis
Eucgr.D01786 0.5kb upstream 0.5kb upstream 500 false Chr04: 31387022-31387521 Eucalyptus grandis
Eucgr.D01786 0.5kb downstream 0.5kb downstream 4418 true Chr04: 31382604-31387021 Eucalyptus grandis
Eucgr.D01786 0.5kb downstream 0.5kb downstream 500 false Chr04: 31382604-31383103 Eucalyptus grandis
Eucgr.D01786 1.0kb upstream 1.0kb upstream 4918 true Chr04: 31383104-31388021 Eucalyptus grandis
Eucgr.D01786 1.0kb upstream 1.0kb upstream 1000 false Chr04: 31387022-31388021 Eucalyptus grandis
Eucgr.D01786 1.0kb downstream 1.0kb downstream 4918 true Chr04: 31382104-31387021 Eucalyptus grandis
Eucgr.D01786 1.0kb downstream 1.0kb downstream 1000 false Chr04: 31382104-31383103 Eucalyptus grandis
Eucgr.D01786 2.0kb upstream 2.0kb upstream 5918 true Chr04: 31383104-31389021 Eucalyptus grandis
Eucgr.D01786 2.0kb upstream 2.0kb upstream 2000 false Chr04: 31387022-31389021 Eucalyptus grandis
Eucgr.D01786 2.0kb downstream 2.0kb downstream 5918 true Chr04: 31381104-31387021 Eucalyptus grandis
Eucgr.D01786 2.0kb downstream 2.0kb downstream 2000 false Chr04: 31381104-31383103 Eucalyptus grandis
Eucgr.D01786 5.0kb upstream 5.0kb upstream 8918 true Chr04: 31383104-31392021 Eucalyptus grandis
Eucgr.D01786 5.0kb upstream 5.0kb upstream 5000 false Chr04: 31387022-31392021 Eucalyptus grandis
Eucgr.D01786 5.0kb downstream 5.0kb downstream 8918 true Chr04: 31378104-31387021 Eucalyptus grandis
Eucgr.D01786 5.0kb downstream 5.0kb downstream 5000 false Chr04: 31378104-31383103 Eucalyptus grandis
Eucgr.D01786 10.0kb upstream 10.0kb upstream 13918 true Chr04: 31383104-31397021 Eucalyptus grandis
Eucgr.D01786 10.0kb upstream 10.0kb upstream 10000 false Chr04: 31387022-31397021 Eucalyptus grandis
Eucgr.D01786 10.0kb downstream 10.0kb downstream 13918 true Chr04: 31373104-31387021 Eucalyptus grandis
Eucgr.D01786 10.0kb downstream 10.0kb downstream 10000 false Chr04: 31373104-31383103 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124072871 5270 Rosid View MSA
123736575 5271 Pentapetalae View MSA
122797498 5272 Eudicot View MSA
122044970 5273 Angiosperm View MSA
121310375 5274 Embryophyte View MSA
123347876 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.22182 0.0 5.52075    
cufflinks 7.14239 0.0 16.1127    
cufflinks 2.13647 0.0 5.3189    
cufflinks 5.39103 0.0 12.3267    
cufflinks 8.13731 0.0 18.207   High
cufflinks 1.00725 0.0 2.70706   Low

0 Strain