Gene : Eucgr.D01818 E. grandis v2.0
Defline:  (1 of 5) PF05633 - Protein of unknown function (DUF793) (DUF793) Genomic Order:  1482
Name:  ? Eucgr.D01818 Secondary Identifier:  ? PAC:32049739
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D01818 0.5kb upstream 0.5kb upstream 2383 true Chr04: 31679737-31682119 Eucalyptus grandis
Eucgr.D01818 0.5kb upstream 0.5kb upstream 500 false Chr04: 31681620-31682119 Eucalyptus grandis
Eucgr.D01818 0.5kb downstream 0.5kb downstream 2383 true Chr04: 31679237-31681619 Eucalyptus grandis
Eucgr.D01818 0.5kb downstream 0.5kb downstream 500 false Chr04: 31679237-31679736 Eucalyptus grandis
Eucgr.D01818 1.0kb upstream 1.0kb upstream 2883 true Chr04: 31679737-31682619 Eucalyptus grandis
Eucgr.D01818 1.0kb upstream 1.0kb upstream 1000 false Chr04: 31681620-31682619 Eucalyptus grandis
Eucgr.D01818 1.0kb downstream 1.0kb downstream 2883 true Chr04: 31678737-31681619 Eucalyptus grandis
Eucgr.D01818 1.0kb downstream 1.0kb downstream 1000 false Chr04: 31678737-31679736 Eucalyptus grandis
Eucgr.D01818 2.0kb upstream 2.0kb upstream 3883 true Chr04: 31679737-31683619 Eucalyptus grandis
Eucgr.D01818 2.0kb upstream 2.0kb upstream 2000 false Chr04: 31681620-31683619 Eucalyptus grandis
Eucgr.D01818 2.0kb downstream 2.0kb downstream 3883 true Chr04: 31677737-31681619 Eucalyptus grandis
Eucgr.D01818 2.0kb downstream 2.0kb downstream 2000 false Chr04: 31677737-31679736 Eucalyptus grandis
Eucgr.D01818 5.0kb upstream 5.0kb upstream 6883 true Chr04: 31679737-31686619 Eucalyptus grandis
Eucgr.D01818 5.0kb upstream 5.0kb upstream 5000 false Chr04: 31681620-31686619 Eucalyptus grandis
Eucgr.D01818 5.0kb downstream 5.0kb downstream 6883 true Chr04: 31674737-31681619 Eucalyptus grandis
Eucgr.D01818 5.0kb downstream 5.0kb downstream 5000 false Chr04: 31674737-31679736 Eucalyptus grandis
Eucgr.D01818 10.0kb upstream 10.0kb upstream 11883 true Chr04: 31679737-31691619 Eucalyptus grandis
Eucgr.D01818 10.0kb upstream 10.0kb upstream 10000 false Chr04: 31681620-31691619 Eucalyptus grandis
Eucgr.D01818 10.0kb downstream 10.0kb downstream 11883 true Chr04: 31669737-31681619 Eucalyptus grandis
Eucgr.D01818 10.0kb downstream 10.0kb downstream 10000 false Chr04: 31669737-31679736 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065163 5270 Rosid View MSA
123741032 5271 Pentapetalae View MSA
122770001 5272 Eudicot View MSA
122049530 5273 Angiosperm View MSA
121311457 5274 Embryophyte View MSA
123348752 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.25425 0.0 3.52063   Low
cufflinks 8.00835 0.0 18.8891    
cufflinks 1.73093 0.0 4.74001    
cufflinks 11.1108 0.0 25.4644   High
cufflinks 5.31669 0.0 13.0005    
cufflinks 3.51231 0.0 8.81499    

0 Strain