Gene : Eucgr.D01804 E. grandis v2.0
Defline:  (1 of 80) PF03168 - Late embryogenesis abundant protein (LEA_2) Genomic Order:  1471
Name:  ? Eucgr.D01804 Secondary Identifier:  ? PAC:32051790
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D01804 0.5kb upstream 0.5kb upstream 1145 true Chr04: 31517689-31518833 Eucalyptus grandis
Eucgr.D01804 0.5kb upstream 0.5kb upstream 500 false Chr04: 31518334-31518833 Eucalyptus grandis
Eucgr.D01804 0.5kb downstream 0.5kb downstream 1145 true Chr04: 31517189-31518333 Eucalyptus grandis
Eucgr.D01804 0.5kb downstream 0.5kb downstream 500 false Chr04: 31517189-31517688 Eucalyptus grandis
Eucgr.D01804 1.0kb upstream 1.0kb upstream 1645 true Chr04: 31517689-31519333 Eucalyptus grandis
Eucgr.D01804 1.0kb upstream 1.0kb upstream 1000 false Chr04: 31518334-31519333 Eucalyptus grandis
Eucgr.D01804 1.0kb downstream 1.0kb downstream 1645 true Chr04: 31516689-31518333 Eucalyptus grandis
Eucgr.D01804 1.0kb downstream 1.0kb downstream 1000 false Chr04: 31516689-31517688 Eucalyptus grandis
Eucgr.D01804 2.0kb upstream 2.0kb upstream 2645 true Chr04: 31517689-31520333 Eucalyptus grandis
Eucgr.D01804 2.0kb upstream 2.0kb upstream 2000 false Chr04: 31518334-31520333 Eucalyptus grandis
Eucgr.D01804 2.0kb downstream 2.0kb downstream 2645 true Chr04: 31515689-31518333 Eucalyptus grandis
Eucgr.D01804 2.0kb downstream 2.0kb downstream 2000 false Chr04: 31515689-31517688 Eucalyptus grandis
Eucgr.D01804 5.0kb upstream 5.0kb upstream 5645 true Chr04: 31517689-31523333 Eucalyptus grandis
Eucgr.D01804 5.0kb upstream 5.0kb upstream 5000 false Chr04: 31518334-31523333 Eucalyptus grandis
Eucgr.D01804 5.0kb downstream 5.0kb downstream 5645 true Chr04: 31512689-31518333 Eucalyptus grandis
Eucgr.D01804 5.0kb downstream 5.0kb downstream 5000 false Chr04: 31512689-31517688 Eucalyptus grandis
Eucgr.D01804 10.0kb upstream 10.0kb upstream 10645 true Chr04: 31517689-31528333 Eucalyptus grandis
Eucgr.D01804 10.0kb upstream 10.0kb upstream 10000 false Chr04: 31518334-31528333 Eucalyptus grandis
Eucgr.D01804 10.0kb downstream 10.0kb downstream 10645 true Chr04: 31507689-31518333 Eucalyptus grandis
Eucgr.D01804 10.0kb downstream 10.0kb downstream 10000 false Chr04: 31507689-31517688 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121780155 5273 Angiosperm View MSA
124074311 5270 Rosid View MSA
123745303 5271 Pentapetalae View MSA
122771446 5272 Eudicot View MSA
121051779 5274 Embryophyte View MSA
123091853 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.53855 0.0 4.96587   Low
cufflinks 9.9116 0.0 26.1902    
cufflinks 6.29448 0.0 17.4511    
cufflinks 14.8061 0.0 37.8881    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain