Gene : Eucgr.D01526 E. grandis v2.0
Defline:  (1 of 2) PTHR31296:SF1 - UPF0565 PROTEIN C2ORF69 Genomic Order:  1237
Name:  ? Eucgr.D01526 Secondary Identifier:  ? PAC:32051154
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D01526 0.5kb upstream 0.5kb upstream 2652 true Chr04: 27250568-27253219 Eucalyptus grandis
Eucgr.D01526 0.5kb upstream 0.5kb upstream 500 false Chr04: 27250568-27251067 Eucalyptus grandis
Eucgr.D01526 0.5kb downstream 0.5kb downstream 2652 true Chr04: 27251068-27253719 Eucalyptus grandis
Eucgr.D01526 0.5kb downstream 0.5kb downstream 500 false Chr04: 27253220-27253719 Eucalyptus grandis
Eucgr.D01526 1.0kb upstream 1.0kb upstream 3152 true Chr04: 27250068-27253219 Eucalyptus grandis
Eucgr.D01526 1.0kb upstream 1.0kb upstream 1000 false Chr04: 27250068-27251067 Eucalyptus grandis
Eucgr.D01526 1.0kb downstream 1.0kb downstream 3152 true Chr04: 27251068-27254219 Eucalyptus grandis
Eucgr.D01526 1.0kb downstream 1.0kb downstream 1000 false Chr04: 27253220-27254219 Eucalyptus grandis
Eucgr.D01526 2.0kb upstream 2.0kb upstream 4152 true Chr04: 27249068-27253219 Eucalyptus grandis
Eucgr.D01526 2.0kb upstream 2.0kb upstream 2000 false Chr04: 27249068-27251067 Eucalyptus grandis
Eucgr.D01526 2.0kb downstream 2.0kb downstream 4152 true Chr04: 27251068-27255219 Eucalyptus grandis
Eucgr.D01526 2.0kb downstream 2.0kb downstream 2000 false Chr04: 27253220-27255219 Eucalyptus grandis
Eucgr.D01526 5.0kb upstream 5.0kb upstream 7152 true Chr04: 27246068-27253219 Eucalyptus grandis
Eucgr.D01526 5.0kb upstream 5.0kb upstream 5000 false Chr04: 27246068-27251067 Eucalyptus grandis
Eucgr.D01526 5.0kb downstream 5.0kb downstream 7152 true Chr04: 27251068-27258219 Eucalyptus grandis
Eucgr.D01526 5.0kb downstream 5.0kb downstream 5000 false Chr04: 27253220-27258219 Eucalyptus grandis
Eucgr.D01526 10.0kb upstream 10.0kb upstream 12152 true Chr04: 27241068-27253219 Eucalyptus grandis
Eucgr.D01526 10.0kb upstream 10.0kb upstream 10000 false Chr04: 27241068-27251067 Eucalyptus grandis
Eucgr.D01526 10.0kb downstream 10.0kb downstream 12152 true Chr04: 27251068-27263219 Eucalyptus grandis
Eucgr.D01526 10.0kb downstream 10.0kb downstream 10000 false Chr04: 27253220-27263219 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067647 5270 Rosid View MSA
123739442 5271 Pentapetalae View MSA
122787900 5272 Eudicot View MSA
122048933 5273 Angiosperm View MSA
121346083 5274 Embryophyte View MSA
123425579 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.39751 0.0 6.61136    
cufflinks 2.38648 0.0 6.56261    
cufflinks 3.04043 0.0 8.18601   High
cufflinks 1.08941 0.0 3.26565   Low
cufflinks 2.13179 0.0 5.95486    
cufflinks 2.37568 0.0 6.56022    

0 Strain