Gene : Eucgr.D01431 E. grandis v2.0
Defline:  (1 of 11) KOG3399 - Predicted Yippee-type zinc-binding protein Genomic Order:  866
Name:  ? Eucgr.D01431 Secondary Identifier:  ? PAC:32050183
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D01431 0.5kb upstream 0.5kb upstream 3127 true Chr04: 18724692-18727818 Eucalyptus grandis
Eucgr.D01431 0.5kb upstream 0.5kb upstream 500 false Chr04: 18724692-18725191 Eucalyptus grandis
Eucgr.D01431 0.5kb downstream 0.5kb downstream 3127 true Chr04: 18725192-18728318 Eucalyptus grandis
Eucgr.D01431 0.5kb downstream 0.5kb downstream 500 false Chr04: 18727819-18728318 Eucalyptus grandis
Eucgr.D01431 1.0kb upstream 1.0kb upstream 3627 true Chr04: 18724192-18727818 Eucalyptus grandis
Eucgr.D01431 1.0kb upstream 1.0kb upstream 1000 false Chr04: 18724192-18725191 Eucalyptus grandis
Eucgr.D01431 1.0kb downstream 1.0kb downstream 3627 true Chr04: 18725192-18728818 Eucalyptus grandis
Eucgr.D01431 1.0kb downstream 1.0kb downstream 1000 false Chr04: 18727819-18728818 Eucalyptus grandis
Eucgr.D01431 2.0kb upstream 2.0kb upstream 4627 true Chr04: 18723192-18727818 Eucalyptus grandis
Eucgr.D01431 2.0kb upstream 2.0kb upstream 2000 false Chr04: 18723192-18725191 Eucalyptus grandis
Eucgr.D01431 2.0kb downstream 2.0kb downstream 4627 true Chr04: 18725192-18729818 Eucalyptus grandis
Eucgr.D01431 2.0kb downstream 2.0kb downstream 2000 false Chr04: 18727819-18729818 Eucalyptus grandis
Eucgr.D01431 5.0kb upstream 5.0kb upstream 7627 true Chr04: 18720192-18727818 Eucalyptus grandis
Eucgr.D01431 5.0kb upstream 5.0kb upstream 5000 false Chr04: 18720192-18725191 Eucalyptus grandis
Eucgr.D01431 5.0kb downstream 5.0kb downstream 7627 true Chr04: 18725192-18732818 Eucalyptus grandis
Eucgr.D01431 5.0kb downstream 5.0kb downstream 5000 false Chr04: 18727819-18732818 Eucalyptus grandis
Eucgr.D01431 10.0kb upstream 10.0kb upstream 12627 true Chr04: 18715192-18727818 Eucalyptus grandis
Eucgr.D01431 10.0kb upstream 10.0kb upstream 10000 false Chr04: 18715192-18725191 Eucalyptus grandis
Eucgr.D01431 10.0kb downstream 10.0kb downstream 12627 true Chr04: 18725192-18737818 Eucalyptus grandis
Eucgr.D01431 10.0kb downstream 10.0kb downstream 10000 false Chr04: 18727819-18737818 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027710 5273 Angiosperm View MSA
124072704 5270 Rosid View MSA
123628182 5271 Pentapetalae View MSA
122796344 5272 Eudicot View MSA
123428914 5275 Viridiplantae View MSA
121349627 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.59596 0.0 20.4456    
cufflinks 19.3504 0.0 43.2506   High
cufflinks 8.80739 0.0 20.8126    
cufflinks 17.8841 0.0 40.083    
cufflinks 14.5458 0.0 33.1017    
cufflinks 6.33565 0.0 15.6078   Low

0 Strain