Gene : Eucgr.D02248 E. grandis v2.0
Defline:  (1 of 9) PF00046//PF01852 - Homeobox domain (Homeobox) // START domain (START) Genomic Order:  1858
Name:  ? Eucgr.D02248 Secondary Identifier:  ? PAC:32049606
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D02248 0.5kb upstream 0.5kb upstream 7812 true Chr04: 35926150-35933961 Eucalyptus grandis
Eucgr.D02248 0.5kb upstream 0.5kb upstream 500 false Chr04: 35926150-35926649 Eucalyptus grandis
Eucgr.D02248 0.5kb downstream 0.5kb downstream 7812 true Chr04: 35926650-35934461 Eucalyptus grandis
Eucgr.D02248 0.5kb downstream 0.5kb downstream 500 false Chr04: 35933962-35934461 Eucalyptus grandis
Eucgr.D02248 1.0kb upstream 1.0kb upstream 8312 true Chr04: 35925650-35933961 Eucalyptus grandis
Eucgr.D02248 1.0kb upstream 1.0kb upstream 1000 false Chr04: 35925650-35926649 Eucalyptus grandis
Eucgr.D02248 1.0kb downstream 1.0kb downstream 8312 true Chr04: 35926650-35934961 Eucalyptus grandis
Eucgr.D02248 1.0kb downstream 1.0kb downstream 1000 false Chr04: 35933962-35934961 Eucalyptus grandis
Eucgr.D02248 2.0kb upstream 2.0kb upstream 9312 true Chr04: 35924650-35933961 Eucalyptus grandis
Eucgr.D02248 2.0kb upstream 2.0kb upstream 2000 false Chr04: 35924650-35926649 Eucalyptus grandis
Eucgr.D02248 2.0kb downstream 2.0kb downstream 9312 true Chr04: 35926650-35935961 Eucalyptus grandis
Eucgr.D02248 2.0kb downstream 2.0kb downstream 2000 false Chr04: 35933962-35935961 Eucalyptus grandis
Eucgr.D02248 5.0kb upstream 5.0kb upstream 12312 true Chr04: 35921650-35933961 Eucalyptus grandis
Eucgr.D02248 5.0kb upstream 5.0kb upstream 5000 false Chr04: 35921650-35926649 Eucalyptus grandis
Eucgr.D02248 5.0kb downstream 5.0kb downstream 12312 true Chr04: 35926650-35938961 Eucalyptus grandis
Eucgr.D02248 5.0kb downstream 5.0kb downstream 5000 false Chr04: 35933962-35938961 Eucalyptus grandis
Eucgr.D02248 10.0kb upstream 10.0kb upstream 17312 true Chr04: 35916650-35933961 Eucalyptus grandis
Eucgr.D02248 10.0kb upstream 10.0kb upstream 10000 false Chr04: 35916650-35926649 Eucalyptus grandis
Eucgr.D02248 10.0kb downstream 10.0kb downstream 17312 true Chr04: 35926650-35943961 Eucalyptus grandis
Eucgr.D02248 10.0kb downstream 10.0kb downstream 10000 false Chr04: 35933962-35943961 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063291 5270 Rosid View MSA
123740352 5271 Pentapetalae View MSA
122790073 5272 Eudicot View MSA
122048483 5273 Angiosperm View MSA
121350910 5274 Embryophyte View MSA
123381934 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 58.8598 0.0 139.996 High  
cufflinks 0.548774 0.0 1.5542 Low Low
cufflinks 51.1819 0.0 119.393 High  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 49.9771 0.0 117.894 High  

0 Strain