Gene : Eucgr.D02229 E. grandis v2.0
Defline:  (1 of 2) PTHR31062:SF16 - XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 29-RELATED Genomic Order:  1842
Name:  ? Eucgr.D02229 Secondary Identifier:  ? PAC:32050847
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D02229 0.5kb upstream 0.5kb upstream 2850 true Chr04: 35806489-35809338 Eucalyptus grandis
Eucgr.D02229 0.5kb upstream 0.5kb upstream 500 false Chr04: 35808839-35809338 Eucalyptus grandis
Eucgr.D02229 0.5kb downstream 0.5kb downstream 2850 true Chr04: 35805989-35808838 Eucalyptus grandis
Eucgr.D02229 0.5kb downstream 0.5kb downstream 500 false Chr04: 35805989-35806488 Eucalyptus grandis
Eucgr.D02229 1.0kb upstream 1.0kb upstream 3350 true Chr04: 35806489-35809838 Eucalyptus grandis
Eucgr.D02229 1.0kb upstream 1.0kb upstream 1000 false Chr04: 35808839-35809838 Eucalyptus grandis
Eucgr.D02229 1.0kb downstream 1.0kb downstream 3350 true Chr04: 35805489-35808838 Eucalyptus grandis
Eucgr.D02229 1.0kb downstream 1.0kb downstream 1000 false Chr04: 35805489-35806488 Eucalyptus grandis
Eucgr.D02229 2.0kb upstream 2.0kb upstream 4350 true Chr04: 35806489-35810838 Eucalyptus grandis
Eucgr.D02229 2.0kb upstream 2.0kb upstream 2000 false Chr04: 35808839-35810838 Eucalyptus grandis
Eucgr.D02229 2.0kb downstream 2.0kb downstream 4350 true Chr04: 35804489-35808838 Eucalyptus grandis
Eucgr.D02229 2.0kb downstream 2.0kb downstream 2000 false Chr04: 35804489-35806488 Eucalyptus grandis
Eucgr.D02229 5.0kb upstream 5.0kb upstream 7350 true Chr04: 35806489-35813838 Eucalyptus grandis
Eucgr.D02229 5.0kb upstream 5.0kb upstream 5000 false Chr04: 35808839-35813838 Eucalyptus grandis
Eucgr.D02229 5.0kb downstream 5.0kb downstream 7350 true Chr04: 35801489-35808838 Eucalyptus grandis
Eucgr.D02229 5.0kb downstream 5.0kb downstream 5000 false Chr04: 35801489-35806488 Eucalyptus grandis
Eucgr.D02229 10.0kb upstream 10.0kb upstream 12350 true Chr04: 35806489-35818838 Eucalyptus grandis
Eucgr.D02229 10.0kb upstream 10.0kb upstream 10000 false Chr04: 35808839-35818838 Eucalyptus grandis
Eucgr.D02229 10.0kb downstream 10.0kb downstream 12350 true Chr04: 35796489-35808838 Eucalyptus grandis
Eucgr.D02229 10.0kb downstream 10.0kb downstream 10000 false Chr04: 35796489-35806488 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067277 5270 Rosid View MSA
123745319 5271 Pentapetalae View MSA
122794660 5272 Eudicot View MSA
122049542 5273 Angiosperm View MSA
121347970 5274 Embryophyte View MSA
123380694 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.2049 0.0 26.5603    
cufflinks 76.1095 0.0 169.133 High  
cufflinks 17.1249 0.0 39.4636    
cufflinks 77.1138 0.0 171.214 High  
cufflinks 66.8281 0.0 148.157 High  
cufflinks 5.27053 0.0 13.3708   Low

0 Strain