Gene : Eucgr.D02190 E. grandis v2.0
Defline:  (1 of 1) 3.5.1.16 - Acetylornithine deacetylase / N-acetylornithinase Genomic Order:  1806
Name:  ? Eucgr.D02190 Secondary Identifier:  ? PAC:32049702
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis ARGSYN-PWY Eucalyptus grandis pathologic  
Egrandis GLUTORN-PWY Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D02190 0.5kb upstream 0.5kb upstream 5172 true Chr04: 35514005-35519176 Eucalyptus grandis
Eucgr.D02190 0.5kb upstream 0.5kb upstream 500 false Chr04: 35514005-35514504 Eucalyptus grandis
Eucgr.D02190 0.5kb downstream 0.5kb downstream 5172 true Chr04: 35514505-35519676 Eucalyptus grandis
Eucgr.D02190 0.5kb downstream 0.5kb downstream 500 false Chr04: 35519177-35519676 Eucalyptus grandis
Eucgr.D02190 1.0kb upstream 1.0kb upstream 5672 true Chr04: 35513505-35519176 Eucalyptus grandis
Eucgr.D02190 1.0kb upstream 1.0kb upstream 1000 false Chr04: 35513505-35514504 Eucalyptus grandis
Eucgr.D02190 1.0kb downstream 1.0kb downstream 5672 true Chr04: 35514505-35520176 Eucalyptus grandis
Eucgr.D02190 1.0kb downstream 1.0kb downstream 1000 false Chr04: 35519177-35520176 Eucalyptus grandis
Eucgr.D02190 2.0kb upstream 2.0kb upstream 6672 true Chr04: 35512505-35519176 Eucalyptus grandis
Eucgr.D02190 2.0kb upstream 2.0kb upstream 2000 false Chr04: 35512505-35514504 Eucalyptus grandis
Eucgr.D02190 2.0kb downstream 2.0kb downstream 6672 true Chr04: 35514505-35521176 Eucalyptus grandis
Eucgr.D02190 2.0kb downstream 2.0kb downstream 2000 false Chr04: 35519177-35521176 Eucalyptus grandis
Eucgr.D02190 5.0kb upstream 5.0kb upstream 9672 true Chr04: 35509505-35519176 Eucalyptus grandis
Eucgr.D02190 5.0kb upstream 5.0kb upstream 5000 false Chr04: 35509505-35514504 Eucalyptus grandis
Eucgr.D02190 5.0kb downstream 5.0kb downstream 9672 true Chr04: 35514505-35524176 Eucalyptus grandis
Eucgr.D02190 5.0kb downstream 5.0kb downstream 5000 false Chr04: 35519177-35524176 Eucalyptus grandis
Eucgr.D02190 10.0kb upstream 10.0kb upstream 14672 true Chr04: 35504505-35519176 Eucalyptus grandis
Eucgr.D02190 10.0kb upstream 10.0kb upstream 10000 false Chr04: 35504505-35514504 Eucalyptus grandis
Eucgr.D02190 10.0kb downstream 10.0kb downstream 14672 true Chr04: 35514505-35529176 Eucalyptus grandis
Eucgr.D02190 10.0kb downstream 10.0kb downstream 10000 false Chr04: 35519177-35529176 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065214 5270 Rosid View MSA
123738237 5271 Pentapetalae View MSA
122790334 5272 Eudicot View MSA
122044666 5273 Angiosperm View MSA
121348165 5274 Embryophyte View MSA
123425283 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.7093 0.0 48.1606    
cufflinks 42.0883 0.0 116.065   High
cufflinks 13.6289 0.0 46.025    
cufflinks 22.8108 0.0 51.9135    
cufflinks 15.5828 0.0 35.9728    
cufflinks 17.1372 0.0 75.1008    

0 Strain