Gene : Eucgr.D02210 E. grandis v2.0
Defline:  (1 of 1) PTHR31394:SF1 - TRANSMEMBRANE PROTEIN 199 Genomic Order:  1824
Name:  ? Eucgr.D02210 Secondary Identifier:  ? PAC:32049617
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D02210 0.5kb upstream 0.5kb upstream 3176 true Chr04: 35669376-35672551 Eucalyptus grandis
Eucgr.D02210 0.5kb upstream 0.5kb upstream 500 false Chr04: 35669376-35669875 Eucalyptus grandis
Eucgr.D02210 0.5kb downstream 0.5kb downstream 3176 true Chr04: 35669876-35673051 Eucalyptus grandis
Eucgr.D02210 0.5kb downstream 0.5kb downstream 500 false Chr04: 35672552-35673051 Eucalyptus grandis
Eucgr.D02210 1.0kb upstream 1.0kb upstream 3676 true Chr04: 35668876-35672551 Eucalyptus grandis
Eucgr.D02210 1.0kb upstream 1.0kb upstream 1000 false Chr04: 35668876-35669875 Eucalyptus grandis
Eucgr.D02210 1.0kb downstream 1.0kb downstream 3676 true Chr04: 35669876-35673551 Eucalyptus grandis
Eucgr.D02210 1.0kb downstream 1.0kb downstream 1000 false Chr04: 35672552-35673551 Eucalyptus grandis
Eucgr.D02210 2.0kb upstream 2.0kb upstream 4676 true Chr04: 35667876-35672551 Eucalyptus grandis
Eucgr.D02210 2.0kb upstream 2.0kb upstream 2000 false Chr04: 35667876-35669875 Eucalyptus grandis
Eucgr.D02210 2.0kb downstream 2.0kb downstream 4676 true Chr04: 35669876-35674551 Eucalyptus grandis
Eucgr.D02210 2.0kb downstream 2.0kb downstream 2000 false Chr04: 35672552-35674551 Eucalyptus grandis
Eucgr.D02210 5.0kb upstream 5.0kb upstream 7676 true Chr04: 35664876-35672551 Eucalyptus grandis
Eucgr.D02210 5.0kb upstream 5.0kb upstream 5000 false Chr04: 35664876-35669875 Eucalyptus grandis
Eucgr.D02210 5.0kb downstream 5.0kb downstream 7676 true Chr04: 35669876-35677551 Eucalyptus grandis
Eucgr.D02210 5.0kb downstream 5.0kb downstream 5000 false Chr04: 35672552-35677551 Eucalyptus grandis
Eucgr.D02210 10.0kb upstream 10.0kb upstream 12676 true Chr04: 35659876-35672551 Eucalyptus grandis
Eucgr.D02210 10.0kb upstream 10.0kb upstream 10000 false Chr04: 35659876-35669875 Eucalyptus grandis
Eucgr.D02210 10.0kb downstream 10.0kb downstream 12676 true Chr04: 35669876-35682551 Eucalyptus grandis
Eucgr.D02210 10.0kb downstream 10.0kb downstream 10000 false Chr04: 35672552-35682551 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060420 5270 Rosid View MSA
123736376 5271 Pentapetalae View MSA
122786410 5272 Eudicot View MSA
122047904 5273 Angiosperm View MSA
121346393 5274 Embryophyte View MSA
123426086 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.90162 0.0 14.8532    
cufflinks 6.46584 0.0 16.0834    
cufflinks 6.43741 0.0 16.1006    
cufflinks 9.73362 0.0 23.3631    
cufflinks 2.11099 0.0 5.89675   Low
cufflinks 10.1331 0.0 24.1264    

0 Strain