Gene : Eucgr.D02188 E. grandis v2.0
Defline:  (1 of 3) PTHR31100:SF14 - AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 21-RELATED Genomic Order:  1804
Name:  ? Eucgr.D02188 Secondary Identifier:  ? PAC:32050791
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D02188 0.5kb upstream 0.5kb upstream 1331 true Chr04: 35484407-35485737 Eucalyptus grandis
Eucgr.D02188 0.5kb upstream 0.5kb upstream 500 false Chr04: 35485238-35485737 Eucalyptus grandis
Eucgr.D02188 0.5kb downstream 0.5kb downstream 1331 true Chr04: 35483907-35485237 Eucalyptus grandis
Eucgr.D02188 0.5kb downstream 0.5kb downstream 500 false Chr04: 35483907-35484406 Eucalyptus grandis
Eucgr.D02188 1.0kb upstream 1.0kb upstream 1831 true Chr04: 35484407-35486237 Eucalyptus grandis
Eucgr.D02188 1.0kb upstream 1.0kb upstream 1000 false Chr04: 35485238-35486237 Eucalyptus grandis
Eucgr.D02188 1.0kb downstream 1.0kb downstream 1831 true Chr04: 35483407-35485237 Eucalyptus grandis
Eucgr.D02188 1.0kb downstream 1.0kb downstream 1000 false Chr04: 35483407-35484406 Eucalyptus grandis
Eucgr.D02188 2.0kb upstream 2.0kb upstream 2831 true Chr04: 35484407-35487237 Eucalyptus grandis
Eucgr.D02188 2.0kb upstream 2.0kb upstream 2000 false Chr04: 35485238-35487237 Eucalyptus grandis
Eucgr.D02188 2.0kb downstream 2.0kb downstream 2831 true Chr04: 35482407-35485237 Eucalyptus grandis
Eucgr.D02188 2.0kb downstream 2.0kb downstream 2000 false Chr04: 35482407-35484406 Eucalyptus grandis
Eucgr.D02188 5.0kb upstream 5.0kb upstream 5831 true Chr04: 35484407-35490237 Eucalyptus grandis
Eucgr.D02188 5.0kb upstream 5.0kb upstream 5000 false Chr04: 35485238-35490237 Eucalyptus grandis
Eucgr.D02188 5.0kb downstream 5.0kb downstream 5831 true Chr04: 35479407-35485237 Eucalyptus grandis
Eucgr.D02188 5.0kb downstream 5.0kb downstream 5000 false Chr04: 35479407-35484406 Eucalyptus grandis
Eucgr.D02188 10.0kb upstream 10.0kb upstream 10831 true Chr04: 35484407-35495237 Eucalyptus grandis
Eucgr.D02188 10.0kb upstream 10.0kb upstream 10000 false Chr04: 35485238-35495237 Eucalyptus grandis
Eucgr.D02188 10.0kb downstream 10.0kb downstream 10831 true Chr04: 35474407-35485237 Eucalyptus grandis
Eucgr.D02188 10.0kb downstream 10.0kb downstream 10000 false Chr04: 35474407-35484406 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065416 5270 Rosid View MSA
123737026 5271 Pentapetalae View MSA
122789086 5272 Eudicot View MSA
122049731 5273 Angiosperm View MSA
121348557 5274 Embryophyte View MSA
123380913 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.177331 0.0 0.803017 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain