Gene : Eucgr.D02179 E. grandis v2.0
Defline:  (1 of 1) PTHR11715:SF1 - GLYCINE CLEAVAGE SYSTEM H PROTEIN 3, MITOCHONDRIAL Genomic Order:  1795
Name:  ? Eucgr.D02179 Secondary Identifier:  ? PAC:32050169
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D02179 0.5kb upstream 0.5kb upstream 2687 true Chr04: 35385663-35388349 Eucalyptus grandis
Eucgr.D02179 0.5kb upstream 0.5kb upstream 500 false Chr04: 35387850-35388349 Eucalyptus grandis
Eucgr.D02179 0.5kb downstream 0.5kb downstream 2687 true Chr04: 35385163-35387849 Eucalyptus grandis
Eucgr.D02179 0.5kb downstream 0.5kb downstream 500 false Chr04: 35385163-35385662 Eucalyptus grandis
Eucgr.D02179 1.0kb upstream 1.0kb upstream 3187 true Chr04: 35385663-35388849 Eucalyptus grandis
Eucgr.D02179 1.0kb upstream 1.0kb upstream 1000 false Chr04: 35387850-35388849 Eucalyptus grandis
Eucgr.D02179 1.0kb downstream 1.0kb downstream 3187 true Chr04: 35384663-35387849 Eucalyptus grandis
Eucgr.D02179 1.0kb downstream 1.0kb downstream 1000 false Chr04: 35384663-35385662 Eucalyptus grandis
Eucgr.D02179 2.0kb upstream 2.0kb upstream 4187 true Chr04: 35385663-35389849 Eucalyptus grandis
Eucgr.D02179 2.0kb upstream 2.0kb upstream 2000 false Chr04: 35387850-35389849 Eucalyptus grandis
Eucgr.D02179 2.0kb downstream 2.0kb downstream 4187 true Chr04: 35383663-35387849 Eucalyptus grandis
Eucgr.D02179 2.0kb downstream 2.0kb downstream 2000 false Chr04: 35383663-35385662 Eucalyptus grandis
Eucgr.D02179 5.0kb upstream 5.0kb upstream 7187 true Chr04: 35385663-35392849 Eucalyptus grandis
Eucgr.D02179 5.0kb upstream 5.0kb upstream 5000 false Chr04: 35387850-35392849 Eucalyptus grandis
Eucgr.D02179 5.0kb downstream 5.0kb downstream 7187 true Chr04: 35380663-35387849 Eucalyptus grandis
Eucgr.D02179 5.0kb downstream 5.0kb downstream 5000 false Chr04: 35380663-35385662 Eucalyptus grandis
Eucgr.D02179 10.0kb upstream 10.0kb upstream 12187 true Chr04: 35385663-35397849 Eucalyptus grandis
Eucgr.D02179 10.0kb upstream 10.0kb upstream 10000 false Chr04: 35387850-35397849 Eucalyptus grandis
Eucgr.D02179 10.0kb downstream 10.0kb downstream 12187 true Chr04: 35375663-35387849 Eucalyptus grandis
Eucgr.D02179 10.0kb downstream 10.0kb downstream 10000 false Chr04: 35375663-35385662 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065363 5270 Rosid View MSA
123736891 5271 Pentapetalae View MSA
122788661 5272 Eudicot View MSA
122045381 5273 Angiosperm View MSA
121349488 5274 Embryophyte View MSA
123424429 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 111.016 0.0 258.28 High  
cufflinks 2.88981 0.0 8.52454   Low
cufflinks 57.4625 0.0 152.072 High  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 334.164 0.0 1059.4 High  

0 Strain