Gene : Eucgr.D02120 E. grandis v2.0
Defline:  (1 of 2) PTHR13789:SF224 - CTF2A LIKE OXIDOREDUCTASE-RELATED Genomic Order:  1743
Name:  ? Eucgr.D02120 Secondary Identifier:  ? PAC:32049535
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D02120 0.5kb upstream 0.5kb upstream 1944 true Chr04: 34659173-34661116 Eucalyptus grandis
Eucgr.D02120 0.5kb upstream 0.5kb upstream 500 false Chr04: 34660617-34661116 Eucalyptus grandis
Eucgr.D02120 0.5kb downstream 0.5kb downstream 1944 true Chr04: 34658673-34660616 Eucalyptus grandis
Eucgr.D02120 0.5kb downstream 0.5kb downstream 500 false Chr04: 34658673-34659172 Eucalyptus grandis
Eucgr.D02120 1.0kb upstream 1.0kb upstream 2444 true Chr04: 34659173-34661616 Eucalyptus grandis
Eucgr.D02120 1.0kb upstream 1.0kb upstream 1000 false Chr04: 34660617-34661616 Eucalyptus grandis
Eucgr.D02120 1.0kb downstream 1.0kb downstream 2444 true Chr04: 34658173-34660616 Eucalyptus grandis
Eucgr.D02120 1.0kb downstream 1.0kb downstream 1000 false Chr04: 34658173-34659172 Eucalyptus grandis
Eucgr.D02120 2.0kb upstream 2.0kb upstream 3444 true Chr04: 34659173-34662616 Eucalyptus grandis
Eucgr.D02120 2.0kb upstream 2.0kb upstream 2000 false Chr04: 34660617-34662616 Eucalyptus grandis
Eucgr.D02120 2.0kb downstream 2.0kb downstream 3444 true Chr04: 34657173-34660616 Eucalyptus grandis
Eucgr.D02120 2.0kb downstream 2.0kb downstream 2000 false Chr04: 34657173-34659172 Eucalyptus grandis
Eucgr.D02120 5.0kb upstream 5.0kb upstream 6444 true Chr04: 34659173-34665616 Eucalyptus grandis
Eucgr.D02120 5.0kb upstream 5.0kb upstream 5000 false Chr04: 34660617-34665616 Eucalyptus grandis
Eucgr.D02120 5.0kb downstream 5.0kb downstream 6444 true Chr04: 34654173-34660616 Eucalyptus grandis
Eucgr.D02120 5.0kb downstream 5.0kb downstream 5000 false Chr04: 34654173-34659172 Eucalyptus grandis
Eucgr.D02120 10.0kb upstream 10.0kb upstream 11444 true Chr04: 34659173-34670616 Eucalyptus grandis
Eucgr.D02120 10.0kb upstream 10.0kb upstream 10000 false Chr04: 34660617-34670616 Eucalyptus grandis
Eucgr.D02120 10.0kb downstream 10.0kb downstream 11444 true Chr04: 34649173-34660616 Eucalyptus grandis
Eucgr.D02120 10.0kb downstream 10.0kb downstream 10000 false Chr04: 34649173-34659172 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067522 5270 Rosid View MSA
123738011 5271 Pentapetalae View MSA
122791941 5272 Eudicot View MSA
122047624 5273 Angiosperm View MSA
123429089 5275 Viridiplantae View MSA
121349985 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.13036 0.0 15.8485    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.72425 0.0 7.62332    
cufflinks 0.245161 0.0 0.923702 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 8.81801 0.0 22.131    

0 Strain