Gene : Eucgr.D01939 E. grandis v2.0
Defline:  (1 of 12) PTHR11945:SF191 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL14-RELATED Genomic Order:  1592
Name:  ? Eucgr.D01939 Secondary Identifier:  ? PAC:32052154
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D01939 0.5kb upstream 0.5kb upstream 9449 true Chr04: 32933925-32943373 Eucalyptus grandis
Eucgr.D01939 0.5kb upstream 0.5kb upstream 500 false Chr04: 32933925-32934424 Eucalyptus grandis
Eucgr.D01939 0.5kb downstream 0.5kb downstream 9449 true Chr04: 32934425-32943873 Eucalyptus grandis
Eucgr.D01939 0.5kb downstream 0.5kb downstream 500 false Chr04: 32943374-32943873 Eucalyptus grandis
Eucgr.D01939 1.0kb upstream 1.0kb upstream 9949 true Chr04: 32933425-32943373 Eucalyptus grandis
Eucgr.D01939 1.0kb upstream 1.0kb upstream 1000 false Chr04: 32933425-32934424 Eucalyptus grandis
Eucgr.D01939 1.0kb downstream 1.0kb downstream 9949 true Chr04: 32934425-32944373 Eucalyptus grandis
Eucgr.D01939 1.0kb downstream 1.0kb downstream 1000 false Chr04: 32943374-32944373 Eucalyptus grandis
Eucgr.D01939 2.0kb upstream 2.0kb upstream 10949 true Chr04: 32932425-32943373 Eucalyptus grandis
Eucgr.D01939 2.0kb upstream 2.0kb upstream 2000 false Chr04: 32932425-32934424 Eucalyptus grandis
Eucgr.D01939 2.0kb downstream 2.0kb downstream 10949 true Chr04: 32934425-32945373 Eucalyptus grandis
Eucgr.D01939 2.0kb downstream 2.0kb downstream 2000 false Chr04: 32943374-32945373 Eucalyptus grandis
Eucgr.D01939 5.0kb upstream 5.0kb upstream 13949 true Chr04: 32929425-32943373 Eucalyptus grandis
Eucgr.D01939 5.0kb upstream 5.0kb upstream 5000 false Chr04: 32929425-32934424 Eucalyptus grandis
Eucgr.D01939 5.0kb downstream 5.0kb downstream 13949 true Chr04: 32934425-32948373 Eucalyptus grandis
Eucgr.D01939 5.0kb downstream 5.0kb downstream 5000 false Chr04: 32943374-32948373 Eucalyptus grandis
Eucgr.D01939 10.0kb upstream 10.0kb upstream 18949 true Chr04: 32924425-32943373 Eucalyptus grandis
Eucgr.D01939 10.0kb upstream 10.0kb upstream 10000 false Chr04: 32924425-32934424 Eucalyptus grandis
Eucgr.D01939 10.0kb downstream 10.0kb downstream 18949 true Chr04: 32934425-32953373 Eucalyptus grandis
Eucgr.D01939 10.0kb downstream 10.0kb downstream 10000 false Chr04: 32943374-32953373 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124073798 5270 Rosid View MSA
123750432 5271 Pentapetalae View MSA
122795311 5272 Eudicot View MSA
122042392 5273 Angiosperm View MSA
121309956 5274 Embryophyte View MSA
123347576 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.037 0.0 35.3705    
cufflinks 43.6583 0.0 99.1176 High High
cufflinks 12.529 0.0 39.4885   Low
cufflinks 43.8966 0.0 99.6239 High High
cufflinks 24.9452 0.0 56.0534    
cufflinks 18.6575 0.0 50.2592    

0 Strain