Gene : Eucgr.D01859 E. grandis v2.0
Defline:  (1 of 1) PTHR10024:SF225 - C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN Genomic Order:  1522
Name:  ? Eucgr.D01859 Secondary Identifier:  ? PAC:32050921
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D01859 0.5kb upstream 0.5kb upstream 5724 true Chr04: 32096070-32101793 Eucalyptus grandis
Eucgr.D01859 0.5kb upstream 0.5kb upstream 500 false Chr04: 32101294-32101793 Eucalyptus grandis
Eucgr.D01859 0.5kb downstream 0.5kb downstream 5724 true Chr04: 32095570-32101293 Eucalyptus grandis
Eucgr.D01859 0.5kb downstream 0.5kb downstream 500 false Chr04: 32095570-32096069 Eucalyptus grandis
Eucgr.D01859 1.0kb upstream 1.0kb upstream 6224 true Chr04: 32096070-32102293 Eucalyptus grandis
Eucgr.D01859 1.0kb upstream 1.0kb upstream 1000 false Chr04: 32101294-32102293 Eucalyptus grandis
Eucgr.D01859 1.0kb downstream 1.0kb downstream 6224 true Chr04: 32095070-32101293 Eucalyptus grandis
Eucgr.D01859 1.0kb downstream 1.0kb downstream 1000 false Chr04: 32095070-32096069 Eucalyptus grandis
Eucgr.D01859 2.0kb upstream 2.0kb upstream 7224 true Chr04: 32096070-32103293 Eucalyptus grandis
Eucgr.D01859 2.0kb upstream 2.0kb upstream 2000 false Chr04: 32101294-32103293 Eucalyptus grandis
Eucgr.D01859 2.0kb downstream 2.0kb downstream 7224 true Chr04: 32094070-32101293 Eucalyptus grandis
Eucgr.D01859 2.0kb downstream 2.0kb downstream 2000 false Chr04: 32094070-32096069 Eucalyptus grandis
Eucgr.D01859 5.0kb upstream 5.0kb upstream 10224 true Chr04: 32096070-32106293 Eucalyptus grandis
Eucgr.D01859 5.0kb upstream 5.0kb upstream 5000 false Chr04: 32101294-32106293 Eucalyptus grandis
Eucgr.D01859 5.0kb downstream 5.0kb downstream 10224 true Chr04: 32091070-32101293 Eucalyptus grandis
Eucgr.D01859 5.0kb downstream 5.0kb downstream 5000 false Chr04: 32091070-32096069 Eucalyptus grandis
Eucgr.D01859 10.0kb upstream 10.0kb upstream 15224 true Chr04: 32096070-32111293 Eucalyptus grandis
Eucgr.D01859 10.0kb upstream 10.0kb upstream 10000 false Chr04: 32101294-32111293 Eucalyptus grandis
Eucgr.D01859 10.0kb downstream 10.0kb downstream 15224 true Chr04: 32086070-32101293 Eucalyptus grandis
Eucgr.D01859 10.0kb downstream 10.0kb downstream 10000 false Chr04: 32086070-32096069 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124071853 5270 Rosid View MSA
123744879 5271 Pentapetalae View MSA
122793721 5272 Eudicot View MSA
122045075 5273 Angiosperm View MSA
121350979 5274 Embryophyte View MSA
123427289 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.77838 0.0 17.4314   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 3.87711 0.0 9.10161    
cufflinks 0.467316 0.0 1.35123    
cufflinks 1.03845 0.0 2.76802    
cufflinks 0.382522 0.0 1.13096 Low  

0 Strain