Gene : Eucgr.D01861 E. grandis v2.0
Defline:  (1 of 1) PTHR11260:SF220 - GST-CONTAINING FLYWCH ZINC-FINGER PROTEIN Genomic Order:  1523
Name:  ? Eucgr.D01861 Secondary Identifier:  ? PAC:32051604
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-6842 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D01861 0.5kb upstream 0.5kb upstream 5029 true Chr04: 32115184-32120212 Eucalyptus grandis
Eucgr.D01861 0.5kb upstream 0.5kb upstream 500 false Chr04: 32115184-32115683 Eucalyptus grandis
Eucgr.D01861 0.5kb downstream 0.5kb downstream 5029 true Chr04: 32115684-32120712 Eucalyptus grandis
Eucgr.D01861 0.5kb downstream 0.5kb downstream 500 false Chr04: 32120213-32120712 Eucalyptus grandis
Eucgr.D01861 1.0kb upstream 1.0kb upstream 5529 true Chr04: 32114684-32120212 Eucalyptus grandis
Eucgr.D01861 1.0kb upstream 1.0kb upstream 1000 false Chr04: 32114684-32115683 Eucalyptus grandis
Eucgr.D01861 1.0kb downstream 1.0kb downstream 5529 true Chr04: 32115684-32121212 Eucalyptus grandis
Eucgr.D01861 1.0kb downstream 1.0kb downstream 1000 false Chr04: 32120213-32121212 Eucalyptus grandis
Eucgr.D01861 2.0kb upstream 2.0kb upstream 6529 true Chr04: 32113684-32120212 Eucalyptus grandis
Eucgr.D01861 2.0kb upstream 2.0kb upstream 2000 false Chr04: 32113684-32115683 Eucalyptus grandis
Eucgr.D01861 2.0kb downstream 2.0kb downstream 6529 true Chr04: 32115684-32122212 Eucalyptus grandis
Eucgr.D01861 2.0kb downstream 2.0kb downstream 2000 false Chr04: 32120213-32122212 Eucalyptus grandis
Eucgr.D01861 5.0kb upstream 5.0kb upstream 9529 true Chr04: 32110684-32120212 Eucalyptus grandis
Eucgr.D01861 5.0kb upstream 5.0kb upstream 5000 false Chr04: 32110684-32115683 Eucalyptus grandis
Eucgr.D01861 5.0kb downstream 5.0kb downstream 9529 true Chr04: 32115684-32125212 Eucalyptus grandis
Eucgr.D01861 5.0kb downstream 5.0kb downstream 5000 false Chr04: 32120213-32125212 Eucalyptus grandis
Eucgr.D01861 10.0kb upstream 10.0kb upstream 14529 true Chr04: 32105684-32120212 Eucalyptus grandis
Eucgr.D01861 10.0kb upstream 10.0kb upstream 10000 false Chr04: 32105684-32115683 Eucalyptus grandis
Eucgr.D01861 10.0kb downstream 10.0kb downstream 14529 true Chr04: 32115684-32130212 Eucalyptus grandis
Eucgr.D01861 10.0kb downstream 10.0kb downstream 10000 false Chr04: 32120213-32130212 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040873 5273 Angiosperm View MSA
124063351 5270 Rosid View MSA
123751759 5271 Pentapetalae View MSA
122789366 5272 Eudicot View MSA
121350998 5274 Embryophyte View MSA
123428193 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.3033 0.0 61.7356   High
cufflinks 23.0089 0.0 61.9689    
cufflinks 25.5508 0.0 58.4296    
cufflinks 14.2679 0.0 33.1049   Low
cufflinks 20.1386 0.0 47.0366    
cufflinks 18.0458 0.0 41.4592    

0 Strain