Gene : Eucgr.D01870 E. grandis v2.0
Defline:  (1 of 3) PTHR34452:SF2 - MYOSIN HEAVY CHAIN-RELATED PROTEIN Genomic Order:  1532
Name:  ? Eucgr.D01870 Secondary Identifier:  ? PAC:32050269
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D01870 0.5kb upstream 0.5kb upstream 5823 true Chr04: 32231169-32236991 Eucalyptus grandis
Eucgr.D01870 0.5kb upstream 0.5kb upstream 500 false Chr04: 32236492-32236991 Eucalyptus grandis
Eucgr.D01870 0.5kb downstream 0.5kb downstream 5823 true Chr04: 32230669-32236491 Eucalyptus grandis
Eucgr.D01870 0.5kb downstream 0.5kb downstream 500 false Chr04: 32230669-32231168 Eucalyptus grandis
Eucgr.D01870 1.0kb upstream 1.0kb upstream 6323 true Chr04: 32231169-32237491 Eucalyptus grandis
Eucgr.D01870 1.0kb upstream 1.0kb upstream 1000 false Chr04: 32236492-32237491 Eucalyptus grandis
Eucgr.D01870 1.0kb downstream 1.0kb downstream 6323 true Chr04: 32230169-32236491 Eucalyptus grandis
Eucgr.D01870 1.0kb downstream 1.0kb downstream 1000 false Chr04: 32230169-32231168 Eucalyptus grandis
Eucgr.D01870 2.0kb upstream 2.0kb upstream 7323 true Chr04: 32231169-32238491 Eucalyptus grandis
Eucgr.D01870 2.0kb upstream 2.0kb upstream 2000 false Chr04: 32236492-32238491 Eucalyptus grandis
Eucgr.D01870 2.0kb downstream 2.0kb downstream 7323 true Chr04: 32229169-32236491 Eucalyptus grandis
Eucgr.D01870 2.0kb downstream 2.0kb downstream 2000 false Chr04: 32229169-32231168 Eucalyptus grandis
Eucgr.D01870 5.0kb upstream 5.0kb upstream 10323 true Chr04: 32231169-32241491 Eucalyptus grandis
Eucgr.D01870 5.0kb upstream 5.0kb upstream 5000 false Chr04: 32236492-32241491 Eucalyptus grandis
Eucgr.D01870 5.0kb downstream 5.0kb downstream 10323 true Chr04: 32226169-32236491 Eucalyptus grandis
Eucgr.D01870 5.0kb downstream 5.0kb downstream 5000 false Chr04: 32226169-32231168 Eucalyptus grandis
Eucgr.D01870 10.0kb upstream 10.0kb upstream 15323 true Chr04: 32231169-32246491 Eucalyptus grandis
Eucgr.D01870 10.0kb upstream 10.0kb upstream 10000 false Chr04: 32236492-32246491 Eucalyptus grandis
Eucgr.D01870 10.0kb downstream 10.0kb downstream 15323 true Chr04: 32221169-32236491 Eucalyptus grandis
Eucgr.D01870 10.0kb downstream 10.0kb downstream 10000 false Chr04: 32221169-32231168 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040955 5273 Angiosperm View MSA
124066145 5270 Rosid View MSA
123747619 5271 Pentapetalae View MSA
122785648 5272 Eudicot View MSA
121348283 5274 Embryophyte View MSA
123428094 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.99721 0.0 6.94297    
cufflinks 18.7068 0.0 41.9601   High
cufflinks 2.24684 0.0 5.30947    
cufflinks 11.8464 0.0 26.2548    
cufflinks 2.82603 0.0 6.56734    
cufflinks 3.40153 0.0 7.83827    

0 Strain