Gene : Eucgr.L00156 E. grandis v2.0
Defline:  (1 of 4) PTHR10343:SF51 - SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1 Genomic Order:  932
Name:  ? Eucgr.L00156 Secondary Identifier:  ? PAC:32049623
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L00156 0.5kb upstream 0.5kb upstream 6407 true Chr04: 20343548-20349954 Eucalyptus grandis
Eucgr.L00156 0.5kb upstream 0.5kb upstream 500 false Chr04: 20343548-20344047 Eucalyptus grandis
Eucgr.L00156 0.5kb downstream 0.5kb downstream 6407 true Chr04: 20344048-20350454 Eucalyptus grandis
Eucgr.L00156 0.5kb downstream 0.5kb downstream 500 false Chr04: 20349955-20350454 Eucalyptus grandis
Eucgr.L00156 1.0kb upstream 1.0kb upstream 6907 true Chr04: 20343048-20349954 Eucalyptus grandis
Eucgr.L00156 1.0kb upstream 1.0kb upstream 1000 false Chr04: 20343048-20344047 Eucalyptus grandis
Eucgr.L00156 1.0kb downstream 1.0kb downstream 6907 true Chr04: 20344048-20350954 Eucalyptus grandis
Eucgr.L00156 1.0kb downstream 1.0kb downstream 1000 false Chr04: 20349955-20350954 Eucalyptus grandis
Eucgr.L00156 2.0kb upstream 2.0kb upstream 7907 true Chr04: 20342048-20349954 Eucalyptus grandis
Eucgr.L00156 2.0kb upstream 2.0kb upstream 2000 false Chr04: 20342048-20344047 Eucalyptus grandis
Eucgr.L00156 2.0kb downstream 2.0kb downstream 7907 true Chr04: 20344048-20351954 Eucalyptus grandis
Eucgr.L00156 2.0kb downstream 2.0kb downstream 2000 false Chr04: 20349955-20351954 Eucalyptus grandis
Eucgr.L00156 5.0kb upstream 5.0kb upstream 10907 true Chr04: 20339048-20349954 Eucalyptus grandis
Eucgr.L00156 5.0kb upstream 5.0kb upstream 5000 false Chr04: 20339048-20344047 Eucalyptus grandis
Eucgr.L00156 5.0kb downstream 5.0kb downstream 10907 true Chr04: 20344048-20354954 Eucalyptus grandis
Eucgr.L00156 5.0kb downstream 5.0kb downstream 5000 false Chr04: 20349955-20354954 Eucalyptus grandis
Eucgr.L00156 10.0kb upstream 10.0kb upstream 15907 true Chr04: 20334048-20349954 Eucalyptus grandis
Eucgr.L00156 10.0kb upstream 10.0kb upstream 10000 false Chr04: 20334048-20344047 Eucalyptus grandis
Eucgr.L00156 10.0kb downstream 10.0kb downstream 15907 true Chr04: 20344048-20359954 Eucalyptus grandis
Eucgr.L00156 10.0kb downstream 10.0kb downstream 10000 false Chr04: 20349955-20359954 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063365 5270 Rosid View MSA
123740870 5271 Pentapetalae View MSA
122792277 5272 Eudicot View MSA
122041753 5273 Angiosperm View MSA
121345261 5274 Embryophyte View MSA
123426874 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.1995 0.0 27.8696    
cufflinks 5.32243 0.0 13.017    
cufflinks 10.3928 0.0 23.9967    
cufflinks 6.64198 0.0 15.8841    
cufflinks 4.30862 0.0 10.7917   Low
cufflinks 15.3272 0.0 34.5623   High

0 Strain