Gene : Eucgr.D02651 E. grandis v2.0
Defline:  (1 of 1) PTHR12802:SF43 - PROTEIN CCA1-RELATED Genomic Order:  2222
Name:  ? Eucgr.D02651 Secondary Identifier:  ? PAC:32052261
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D02651 0.5kb upstream 0.5kb upstream 7879 true Chr04: 40425549-40433427 Eucalyptus grandis
Eucgr.D02651 0.5kb upstream 0.5kb upstream 500 false Chr04: 40425549-40426048 Eucalyptus grandis
Eucgr.D02651 0.5kb downstream 0.5kb downstream 7879 true Chr04: 40426049-40433927 Eucalyptus grandis
Eucgr.D02651 0.5kb downstream 0.5kb downstream 500 false Chr04: 40433428-40433927 Eucalyptus grandis
Eucgr.D02651 1.0kb upstream 1.0kb upstream 8379 true Chr04: 40425049-40433427 Eucalyptus grandis
Eucgr.D02651 1.0kb upstream 1.0kb upstream 1000 false Chr04: 40425049-40426048 Eucalyptus grandis
Eucgr.D02651 1.0kb downstream 1.0kb downstream 8379 true Chr04: 40426049-40434427 Eucalyptus grandis
Eucgr.D02651 1.0kb downstream 1.0kb downstream 1000 false Chr04: 40433428-40434427 Eucalyptus grandis
Eucgr.D02651 2.0kb upstream 2.0kb upstream 9379 true Chr04: 40424049-40433427 Eucalyptus grandis
Eucgr.D02651 2.0kb upstream 2.0kb upstream 2000 false Chr04: 40424049-40426048 Eucalyptus grandis
Eucgr.D02651 2.0kb downstream 2.0kb downstream 9379 true Chr04: 40426049-40435427 Eucalyptus grandis
Eucgr.D02651 2.0kb downstream 2.0kb downstream 2000 false Chr04: 40433428-40435427 Eucalyptus grandis
Eucgr.D02651 5.0kb upstream 5.0kb upstream 12379 true Chr04: 40421049-40433427 Eucalyptus grandis
Eucgr.D02651 5.0kb upstream 5.0kb upstream 5000 false Chr04: 40421049-40426048 Eucalyptus grandis
Eucgr.D02651 5.0kb downstream 5.0kb downstream 12379 true Chr04: 40426049-40438427 Eucalyptus grandis
Eucgr.D02651 5.0kb downstream 5.0kb downstream 5000 false Chr04: 40433428-40438427 Eucalyptus grandis
Eucgr.D02651 10.0kb upstream 10.0kb upstream 17379 true Chr04: 40416049-40433427 Eucalyptus grandis
Eucgr.D02651 10.0kb upstream 10.0kb upstream 10000 false Chr04: 40416049-40426048 Eucalyptus grandis
Eucgr.D02651 10.0kb downstream 10.0kb downstream 17379 true Chr04: 40426049-40443427 Eucalyptus grandis
Eucgr.D02651 10.0kb downstream 10.0kb downstream 10000 false Chr04: 40433428-40443427 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066959 5270 Rosid View MSA
123746755 5271 Pentapetalae View MSA
122793236 5272 Eudicot View MSA
122048982 5273 Angiosperm View MSA
121350117 5274 Embryophyte View MSA
123427162 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.32099 0.0 10.4791    
cufflinks 20.0904 0.0 53.7636    
cufflinks 5.35616 0.0 16.299    
cufflinks 20.0855 0.0 53.4417    
cufflinks 23.7248 0.0 69.6616    
cufflinks 1.34185 0.0 3.77421   Low

0 Strain