Gene : Eucgr.D02612 E. grandis v2.0
Defline:  (1 of 3) PTHR10668:SF83 - PYRIDINE NUCLEOTIDE-DISULFIDE OXIDOREDUCTASE DOMAIN-CONTAINING PROTEIN 2 Genomic Order:  2185
Name:  ? Eucgr.D02612 Secondary Identifier:  ? PAC:32050960
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D02612 0.5kb upstream 0.5kb upstream 10610 true Chr04: 40027135-40037744 Eucalyptus grandis
Eucgr.D02612 0.5kb upstream 0.5kb upstream 500 false Chr04: 40037245-40037744 Eucalyptus grandis
Eucgr.D02612 0.5kb downstream 0.5kb downstream 10610 true Chr04: 40026635-40037244 Eucalyptus grandis
Eucgr.D02612 0.5kb downstream 0.5kb downstream 500 false Chr04: 40026635-40027134 Eucalyptus grandis
Eucgr.D02612 1.0kb upstream 1.0kb upstream 11110 true Chr04: 40027135-40038244 Eucalyptus grandis
Eucgr.D02612 1.0kb upstream 1.0kb upstream 1000 false Chr04: 40037245-40038244 Eucalyptus grandis
Eucgr.D02612 1.0kb downstream 1.0kb downstream 11110 true Chr04: 40026135-40037244 Eucalyptus grandis
Eucgr.D02612 1.0kb downstream 1.0kb downstream 1000 false Chr04: 40026135-40027134 Eucalyptus grandis
Eucgr.D02612 2.0kb upstream 2.0kb upstream 12110 true Chr04: 40027135-40039244 Eucalyptus grandis
Eucgr.D02612 2.0kb upstream 2.0kb upstream 2000 false Chr04: 40037245-40039244 Eucalyptus grandis
Eucgr.D02612 2.0kb downstream 2.0kb downstream 12110 true Chr04: 40025135-40037244 Eucalyptus grandis
Eucgr.D02612 2.0kb downstream 2.0kb downstream 2000 false Chr04: 40025135-40027134 Eucalyptus grandis
Eucgr.D02612 5.0kb upstream 5.0kb upstream 15110 true Chr04: 40027135-40042244 Eucalyptus grandis
Eucgr.D02612 5.0kb upstream 5.0kb upstream 5000 false Chr04: 40037245-40042244 Eucalyptus grandis
Eucgr.D02612 5.0kb downstream 5.0kb downstream 15110 true Chr04: 40022135-40037244 Eucalyptus grandis
Eucgr.D02612 5.0kb downstream 5.0kb downstream 5000 false Chr04: 40022135-40027134 Eucalyptus grandis
Eucgr.D02612 10.0kb upstream 10.0kb upstream 20110 true Chr04: 40027135-40047244 Eucalyptus grandis
Eucgr.D02612 10.0kb upstream 10.0kb upstream 10000 false Chr04: 40037245-40047244 Eucalyptus grandis
Eucgr.D02612 10.0kb downstream 10.0kb downstream 20110 true Chr04: 40017135-40037244 Eucalyptus grandis
Eucgr.D02612 10.0kb downstream 10.0kb downstream 10000 false Chr04: 40017135-40027134 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065962 5270 Rosid View MSA
123745918 5271 Pentapetalae View MSA
122796852 5272 Eudicot View MSA
122043092 5273 Angiosperm View MSA
121344165 5274 Embryophyte View MSA
123379989 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.34022 0.0 25.7471    
cufflinks 8.98515 0.0 26.081    
cufflinks 9.35512 0.0 29.1387    
cufflinks 1.95743 0.0 5.46099   Low
cufflinks 13.631 0.0 34.1086    
cufflinks 6.99047 0.0 21.0895    

0 Strain