Gene : Eucgr.D02600 E. grandis v2.0
Defline:  (1 of 3) PF11947 - Protein of unknown function (DUF3464) (DUF3464) Genomic Order:  2173
Name:  ? Eucgr.D02600 Secondary Identifier:  ? PAC:32052089
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D02600 0.5kb upstream 0.5kb upstream 2710 true Chr04: 39954510-39957219 Eucalyptus grandis
Eucgr.D02600 0.5kb upstream 0.5kb upstream 500 false Chr04: 39956720-39957219 Eucalyptus grandis
Eucgr.D02600 0.5kb downstream 0.5kb downstream 2710 true Chr04: 39954010-39956719 Eucalyptus grandis
Eucgr.D02600 0.5kb downstream 0.5kb downstream 500 false Chr04: 39954010-39954509 Eucalyptus grandis
Eucgr.D02600 1.0kb upstream 1.0kb upstream 3210 true Chr04: 39954510-39957719 Eucalyptus grandis
Eucgr.D02600 1.0kb upstream 1.0kb upstream 1000 false Chr04: 39956720-39957719 Eucalyptus grandis
Eucgr.D02600 1.0kb downstream 1.0kb downstream 3210 true Chr04: 39953510-39956719 Eucalyptus grandis
Eucgr.D02600 1.0kb downstream 1.0kb downstream 1000 false Chr04: 39953510-39954509 Eucalyptus grandis
Eucgr.D02600 2.0kb upstream 2.0kb upstream 4210 true Chr04: 39954510-39958719 Eucalyptus grandis
Eucgr.D02600 2.0kb upstream 2.0kb upstream 2000 false Chr04: 39956720-39958719 Eucalyptus grandis
Eucgr.D02600 2.0kb downstream 2.0kb downstream 4210 true Chr04: 39952510-39956719 Eucalyptus grandis
Eucgr.D02600 2.0kb downstream 2.0kb downstream 2000 false Chr04: 39952510-39954509 Eucalyptus grandis
Eucgr.D02600 5.0kb upstream 5.0kb upstream 7210 true Chr04: 39954510-39961719 Eucalyptus grandis
Eucgr.D02600 5.0kb upstream 5.0kb upstream 5000 false Chr04: 39956720-39961719 Eucalyptus grandis
Eucgr.D02600 5.0kb downstream 5.0kb downstream 7210 true Chr04: 39949510-39956719 Eucalyptus grandis
Eucgr.D02600 5.0kb downstream 5.0kb downstream 5000 false Chr04: 39949510-39954509 Eucalyptus grandis
Eucgr.D02600 10.0kb upstream 10.0kb upstream 12210 true Chr04: 39954510-39966719 Eucalyptus grandis
Eucgr.D02600 10.0kb upstream 10.0kb upstream 10000 false Chr04: 39956720-39966719 Eucalyptus grandis
Eucgr.D02600 10.0kb downstream 10.0kb downstream 12210 true Chr04: 39944510-39956719 Eucalyptus grandis
Eucgr.D02600 10.0kb downstream 10.0kb downstream 10000 false Chr04: 39944510-39954509 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067911 5270 Rosid View MSA
123738639 5271 Pentapetalae View MSA
122792645 5272 Eudicot View MSA
122046649 5273 Angiosperm View MSA
121348094 5274 Embryophyte View MSA
123428537 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.2775 0.0 35.473    
cufflinks 1.97232 0.0 6.0946   Low
cufflinks 7.40932 0.0 18.8174    
cufflinks 2.48453 0.0 8.50848    
cufflinks 3.08811 0.0 8.83186    
cufflinks 36.1516 0.0 90.6822 High High

0 Strain